Bacillus pumilus SH-B9: UP12_00010
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Entry
UP12_00010 CDS
T04776
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus03030
DNA replication
bpus03430
Mismatch repair
bpus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UP12_00010
03430 Mismatch repair
UP12_00010
03440 Homologous recombination
UP12_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpus03032
]
UP12_00010
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_00010
Enzymes [BR:
bpus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UP12_00010
DNA replication proteins [BR:
bpus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UP12_00010
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UP12_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AMM95856
LinkDB
All DBs
Position
1538..2674
Genome browser
AA seq
378 aa
AA seq
DB search
MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDEGVSLTGSDSDISIESFIPQR
DGDLEVITIDRPGSIVLQARFFSEIVKKLPMATVEIEVEQNHLTIIRSGSAEFNLNGLDA
EEYPHLPQIEEHHAFQIPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEKGELICTATD
SHRLALRKAKLDIDEESSYNVVIPGKSLTELSRILDDGQDLVSIVITETQVLFKAQNVLF
FSRLLDGNYPDTARLIPQESKTDVVVNTKEFLQAIDRASLLAREGRNNVVKLSADPEQSL
EISSNSPEIGKVVETVQADDIKGEDLKISFSPKYMLDALKVLEGTEIHVSFTGAMRPFLL
RTPNDDSILQLILPVRTY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacgatacaaaaagatcgtcttgtcgaaagtgtccaagatgtattaaaggcc
gtatcctctagaacaacgatccctattttgacagggatcaaaattgttgcatctgatgag
ggggtttctctcacaggaagcgactctgatatctcaattgaatcctttattcctcaaaga
gatggagatttagaagtaatcacgattgatcgtccagggagtattgtgcttcaggcccgc
ttctttagtgaaattgtgaagaaactgccaatggctactgtcgaaattgaagtagaacaa
aatcacctcaccatcatccgttctggttcagcggaatttaacttaaacggtctagatgct
gaggaatatccacatcttccgcaaatcgaagagcatcatgcatttcaaattccgacagat
ctacttaaaaacttaattcgtcaaaccgtttttgcagtgtccacctcagaaacacgtcct
atcttgacaggtgtaaactggaaggtggaaaaaggtgaattaatatgcacagcgacggat
agtcaccgtcttgctttaagaaaagcgaagctggatattgacgaggaaagctcatacaat
gtcgtcattccagggaagagcttaacagaactaagtagaatccttgatgacggacaagat
cttgtgagcatcgtgattacagaaacgcaagttctctttaaagcacaaaacgtgttgttc
ttctcaagattgctggatggtaattatccagatacagctcgcctgatcccgcaagaaagt
aaaacagatgttgtggtcaacacgaaggaattccttcaagctattgatcgtgcatcactt
ttggcaagagagggacgtaataatgttgtaaagctgtcagctgatcctgaacaaagcctt
gagatttcttctaattcacctgaaattggtaaagtagtcgaaacggttcaagcagatgat
attaaaggggaggacctcaaaatctcctttagtccaaaatatatgctagatgcgttaaaa
gtattagagggaacagaaattcatgtaagtttcactggtgccatgagaccgttcctgttg
cgcacaccaaatgatgattcaatcttgcagttgattcttccagtcagaacatattaa
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