Bacillus pumilus SH-B9: UP12_00680
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Entry
UP12_00680 CDS
T04776
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UP12_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpus03021
]
UP12_00680
03400 DNA repair and recombination proteins [BR:
bpus03400
]
UP12_00680
Enzymes [BR:
bpus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UP12_00680
Transcription machinery [BR:
bpus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UP12_00680
DNA repair and recombination proteins [BR:
bpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UP12_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AMM95957
LinkDB
All DBs
Position
125075..128656
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYPVAESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFSSDQEILDLIGENEYLRNTLEKDNTENADKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQKLAETLVDPETG
EILAEKGQILDRRVLDKVLPYLENGIGFRKLYPNGGVVEDEVELQSIKIYAPSDQEGEQV
INVIGNAYVEEAVKNITPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANALLADDGSFIDDNIIARFRGEN
TVVPRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPESPIVGT
GMEYVSGKDSGAAVICRYPGVVERVEAKNIWVRRYEDVDGQQVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDDEETKKADGLALSNDEDAADLAPVDLERDAVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctacgcacgcata
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagatatatccccaattgaggattttactggt
aacctttctcttgaattcattgattacagcctaggggatcctaagtatcctgtagcagaa
tcaaaagaacgtgatgtaacttactctgctccactaagagtaaaagttcgtttaattaac
aaagaaactggagaagtaaaagaccaagatgtgttcatgggtgatttcccaatcatgaca
gacacaggtacttttatcattaacggtgcggaacgtgtaatcgtttctcagttagtacgt
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttactgcg
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaggatgtagtc
tatgtacgcatcgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcagctctgatcaagagattcttgacctcattggcgagaatgaatacttacgcaacacg
ctggaaaaagacaatacagagaatgcggataaagcacttctcgaaatctacgagcgtctc
cgtcctggagagccgccaactgttgaaaatgcgaaaagcctgctagactctcgcttcttc
gatccgaagagatatgacctggcaaatgttggacgctacaagattaataaaaagcttcat
attaaaaatagactgttcaatcaaaaattggctgagacgttagttgaccctgaaacaggt
gaaattctagcagaaaaaggtcaaattttagacagaagagttcttgataaagttcttcca
tacttagaaaacggcatcggatttagaaagctatatccaaatggtggcgtagtagaagat
gaagtagaacttcaatctattaagatttatgcaccgtctgatcaagaaggcgagcaagtg
atcaacgtgatcgggaatgcatacgtagaggaagctgtgaaaaacatcacgccttctgac
atcattgcatcgatcagttacttcttcaaccttcttcatggtgtaggtgacacagatgat
atcgatcaccttggtaaccgtcgcctgcgttctgtaggtgagcttctgcagaaccaattc
cgtattggtttaagcagaatggagcgtgttgttcgtgaaagaatgtcgatccaagacaca
aacacgatcacacctcagcaactaatcaatattcgtcctgtgatcgcttctatcaaagag
ttctttggtagttctcagctttctcagttcatggatcaaacaaacccgcttgctgaattg
acgcacaaacgtcgtctgtcagcgcttgggcctggtggtttgacacgtgagcgtgcagga
atggaagttcgtgacgttcactactctcactatggtcgtatgtgtccgattgaaacacca
gagggtccaaacattggtttgatcaactctctatcttcatttgcaaaagtgaatcgtttc
ggctttattgaaacaccttaccgcagggttgatcctgaaacaggtaaagtgacaccgaga
atcgactacttaactgctgatgaagaggataactacgtagtagcacaagcgaacgctctt
ctagctgatgatggttcgtttatcgatgataatatcattgctcgtttcagaggggaaaac
accgttgttcctcgaaaccgcgttgactacatggacgtttcgccaaagcaggttgtttct
gcagcgacagcatgtattccattcttagaaaacgatgactctaaccgtgctctaatggga
gcgaacatgcaacgtcaggctgtgcctttgatgcagccggaatcaccgattgttggtaca
ggtatggagtatgtatcaggtaaagactctggtgctgctgtcatctgccgctacccaggt
gttgtagaacgtgttgaagcaaaaaatatttgggttcgccgctatgaagatgtcgacgga
caacaagtcaaaggaaacctagacaaatacagcttgctgaaatttgtccgctctaaccaa
gggacttgctacaaccagcgtccaatcgtaagtgttggagatgaagtcgtaaaaggagaa
atccttgcagacggtccttcaatggaaaaaggtgaattggctctaggacgtaacgtcatg
gtcggcttcatgacttgggacggttataactacgaggatgcgatcatcatgagtgagcgc
cttgtaaaagatgacgtctacacgtcgattcatattgaagaatatgaatcagaagctcgt
gatacaaagcttggaccggaagaaatcactcgtgatattccaaacgttggggaagatgct
ttacgcaaccttgacgagcgtggaatcatccgtatcggtgcagaagtaaaagacggagac
cttcttgtagggaaagtaacgcctaaaggtgtaaccgaactaacagctgaagaacgtcta
ttacatgcaatcttcggtgaaaaggctcgtgaagtacgtgatacgtctctacgtgttcca
cacggcggcggcggaattatccacgacgtcaaagtctttaaccgtgaagatggagatgaa
ttacctccgggtgttaaccagttagtccgcgtatacatcgttcagaagcgtaagatttct
gaaggtgacaaaatggccggacgacatggtaacaaaggggttatctctaaaatccttcca
gaagaagatatgccgtatcttccagatggaacaccgattgatatcatgttaaaccctcta
ggggtaccatctcgtatgaacatcggtcaggtacttgagcttcatatgggtatggctgca
cgttaccttggcatccacattgcgtcaccagtatttgatggtgcgcgtgaggaagatgtt
tgggaaacgcttgaagaagcaggtatgtcccgtgatgcgaaaacagtcctttatgacggt
cgaactggtgaaccattcgataaccgtgtatcagtcggaatcatgtacatgatcaaactg
gctcacatggttgacgataaacttcacgcacgttcaactggtccatactcacttgttacg
cagcagccacttggcggtaaagcacagtttggtggtcagcgtttcggagagatggaagta
tgggcacttgaagcttacggtgcagcatacacacttcaagagatcttaacagttaaatcg
gatgacgttgtgggtcgtgtgaaaacatacgaagccatcgtcaaaggggataacgtccct
gaaccaggtgtccctgaatcattcaaagtgttaatcaaagaacttcaaagtttaggtatg
gatgtcaaaatcctatctggcgatgaagaagagatagaaatgagagatttagaagacgat
gaggaaacgaagaaagcagacggattagcgttatctaatgacgaagatgctgcagacctc
gcacctgtcgatcttgaacgtgacgcagtcacaaaagaatag
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integrated database retrieval system
