Paraburkholderia phytofirmans PsJN: Bphyt_2417
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Entry
Bphyt_2417 CDS
T00765
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy01501
beta-Lactam resistance
bpy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphyt_2417
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Bphyt_2417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpy02000
]
Bphyt_2417
01504 Antimicrobial resistance genes [BR:
bpy01504
]
Bphyt_2417
Transporters [BR:
bpy02000
]
Other transporters
Pores ion channels [TC:
1
]
Bphyt_2417
Antimicrobial resistance genes [BR:
bpy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Bphyt_2417
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Bphyt_2417
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Bphyt_2417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LRAT
Peptidase_C97
Motif
Other DBs
NCBI-ProteinID:
ACD16813
UniProt:
B2T5F6
LinkDB
All DBs
Position
1:complement(2720843..2722942)
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AA seq
699 aa
AA seq
DB search
METAEIDGLATSPAWARTIGRIEVGAHLVSEREGYTHHGIYAGNGLVIHYGGFLQSVKRR
PVEYIALRDFAAGNGITIQPEPDAVYSGIQAVERARSRLGEDRYRLLTNNCEHFCTWCVL
GSGRSQQVRRCLRNPWAGVKTLFALAEDGCRDFAAPALRDVHRLTRALCRQLRGECTTRF
STRNRLSNYLMGKRMSIQSNARRRASGAMKSALSLIFTAALSACVNYAGIHGEAKTADPQ
QFATRQSLPAEQGHWPAANWADQFGDAQLSSLISEALSSNPTLDQARARVAAAFAYTETA
KASTMPRVDASYSLTREQLSNTTFLPPPFGGSWQTENRGVLGASFDLDLWGKNREALKAA
ISQSQASQADAEVVKLTLTTSIARAYNQLARLYVLRDIAQKEITQRERIDRITAGRIATG
LDTEVERKTVHANLATSRATLKSLDGRILTTRYQIAALLGAGPDRGLQISRPTLGLGDEV
RLPDNLPADLVSRRPEIVAARWRIDAMAHDVKEAKAEFYPDINLSAAIGLDAFGFGRFLT
AASRTASVGPAIHLPIFDAGELRAQLKGRYADFDYAVAAYNQTLVTALNEVATQLADVHS
TDAQLVDAQAAQEAARQADELALIQYKAGLTNQLTVLNVDLNALSADQAVANLRMNRRDQ
QIALASALGGGFVDEPNAAPAAAPRANATAPGAPVVAVR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgcagagattgatggcctcgcaacgtcgccggcttgggcccgaacaattggg
cgcatcgaggtcggcgctcatctcgtgagtgagcgggaaggctatacgcaccatggaata
tatgctgggaatggactcgtcattcactacggaggctttcttcaatccgttaaacgccgt
cccgttgaatatattgcgctgcgcgactttgcagcgggaaacggaataacgattcagccc
gaaccagatgctgtttatagcggaatccaagccgtggagagagcccggtcccgtctcggt
gaagaccgatatcgattgttgaccaataactgcgaacacttctgtacttggtgtgtgctg
gggtccgggcgtagtcagcaggtgcgtcgatgcctgaggaatccatgggcaggtgtcaag
acgctgtttgcgctagcggaagacggttgccgtgatttcgcggcgccggctcttcgggac
gttcaccggctaacgcgcgctttgtgtcgccaacttcggggcgagtgcaccacgcgcttt
tccacgcggaaccgcttaagcaactatctgatgggcaagagaatgagcattcagtcaaac
gcgagacggcgtgcatcaggcgcaatgaaatcggcgctgtctttgatcttcacggcggcg
ctgtcggcttgcgtgaactatgcaggcatccatggcgaagcgaaaacggccgacccgcag
cagtttgcaacgcggcaaagccttcccgccgagcaaggccattggcccgcagccaattgg
gctgaccagtttggcgatgcgcaactgagctcgctgatcagcgaagcattgagcagcaac
ccgacgctcgaccaggcgcgtgcccgcgtggcggccgccttcgcctacaccgagacggcg
aaggcgagcacgatgccgcgtgtcgacgccagctattcgctcactcgcgaacagttgtcg
aatacgactttcctgccgcctccgttcggcggctcatggcagacggagaacaggggcgtg
ctgggcgcttcctttgatctcgatctgtggggcaagaaccgcgaagcgctgaaagcggca
atctcgcagtctcaggcgagccaggccgatgcggaagtcgtcaagctgacattgaccaca
tcgattgcccgcgcctacaaccagcttgcgcgcctatacgtgctgcgcgacatcgcgcaa
aaggaaatcacacagcgcgagcggatcgaccgcattaccgcagggcgaattgcgacaggt
ctcgacacggaagtggagcgcaagacagtgcatgccaatcttgcgacaagtcgcgccact
ttgaaatcgctcgacggacgaatcctcacgacacgctatcagatcgccgcgctgcttggc
gcgggtcctgatcgtggtttgcagatctcacgcccaacgctcggcttgggcgacgaagtg
cgtctgcccgacaatctgcccgccgatctcgtgagtcgccgcccggaaatcgtggccgcg
cgttggcgcatcgatgcgatggcgcacgacgtgaaagaagcgaaagcggagttctatccc
gacatcaacctcagtgccgcaatcgggctcgatgcgttcggcttcggccgctttctgacg
gcggcgagccgcacggcgtcggtcggtccggccattcacctgccgatcttcgacgcaggc
gaattgcgcgcgcagctaaagggccgctacgccgactttgattatgccgtcgcggcctac
aaccagacgctcgtgaccgcgctgaacgaagtcgccacgcaactcgcggacgtgcattcg
acagatgcgcaacttgtcgatgcgcaggccgcgcaggaagcggcccgccaagccgatgaa
ctcgcgcttattcagtacaaggccggcctcacgaatcaactgaccgtccttaacgtcgac
ttgaacgcgttgtccgccgatcaggccgtcgcgaatctgcgcatgaaccgccgggatcag
cagattgcattggcgtccgcgttgggcggcggtttcgtcgacgagccgaacgcagccccc
gcggcggcgccgcgcgccaatgcaacggcacccggcgcgccggtcgtcgctgtgcgctga
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