Bombus pyrosoma: 122567964
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Entry
122567964 CDS
T07776
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122567964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122567964
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122567964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2112
Motif
Other DBs
NCBI-GeneID:
122567964
NCBI-ProteinID:
XP_043583102
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All DBs
Position
LG5:complement(10415534..10419416)
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AA seq
235 aa
AA seq
DB search
MSEETPESEFRLRPMNCELNQLSMPDGSAMLMQGNTAVVAGIYGPIEAKPQKMIYDKASV
EVSYSPIKGPAKVDDRMTEMYIKETCEAAIIVTFHPATAICINVQELEDSGGILACTINA
ACLALINAGIPMKFTIAAVNCMIQEGTENIILDPDTTQLQEARAEFTFAFDSMKKDVICC
NTVGCFTETEFLEAMEKCKQIGARINWEVLLTVVLQIRSISEEIVRLISLLFNYI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaaacgccggaaagtgaatttagattacgaccaatgaattgtgaattaaac
caactttcaatgcctgatggatcggcaatgctaatgcaaggaaatactgctgtagttgct
ggaatatatggaccgatagaagcaaaaccacaaaaaatgatttatgataaagcatcagtc
gaagtatcatacagtcctatcaaaggtccggcaaaggtggatgacagaatgacagaaatg
tatatcaaagaaacttgtgaagctgcaataattgttactttccatccagcaactgctata
tgcattaatgtacaagaattagaagattctggtgggatattagcctgtacaataaatgca
gcatgcttggcacttattaatgctggtatcccaatgaaatttactattgcagcagtgaat
tgtatgatacaggaaggcacagaaaatattatactggatcctgatactactcaattacag
gaagctagagcagaatttacatttgcatttgatagtatgaaaaaagatgtcatatgttgt
aatactgttggttgttttacggagacagaatttttggaagcaatggaaaaatgtaaacaa
atcggcgctagaatcaattgggaagtacttctaaccgtcgtacttcaaattcgatcaatt
tccgaggagatagttcgtctaatcagtttattatttaattacatataa
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