Bombus pyrosoma: 122572166
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Entry
122572166 CDS
T07776
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122572166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122572166
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122572166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_1
TPR_14
TPR_2
TPR_8
TPR_19
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_9
ARM_TT21_C
TPR_6
TPR_10
ANAPC3
TPR_21
BTAD
DUF7017
PknG_TPR
TPR_15
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
122572166
NCBI-ProteinID:
XP_043592755
LinkDB
All DBs
Position
LG10:complement(12706925..12721679)
Genome browser
AA seq
1301 aa
AA seq
DB search
MSNEIKVALKAARDTFREKKYVDVIKKCNKILMRDQNNYNALMLLAAAMKEIDEYKPQVP
LILQKGTKIQADNPLAWYGLVSYYEKNLDNNECYNQLLLAYCKLLEIESDTKFTNIMSRI
SKLSTQLKDVATITRCIEHLIELRKSLDDNKIKVIDKTLGWLLLDNFYNLNKYQNLLESV
FKSTVNDLDATDQQNFYTKYLKILYDKDELIDLVKEAINMHQRFPQDTLPLEYICLAYLE
QSILDENFTDVDITQFYEGCLKLNKECETAKIAKALDLAKSGNLIIARDILKDIVVSTPR
SVCGWMALNQISMRLYCWEDAEVAAKRVLDMKKYKIKNKLLYRMKETLVEATSLTNDKSK
WETAFRMCEEIHPSARLDLIRARLSILLYQPDVETLLNNLESKDETRTHTNILRALYLKQ
NKQYDEAVNILDSAVRKPGLAQTSQAWLLLGTIYWEMAEYNYSLMAFLNGIKADRFNWKC
LVYLGQYYRDYGNDMERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNQDANIKLLQMLT
AQGSGPRWAWLQLGLQYLDQGNAEQAIKAFQHVIRTDPSDSHCWESLADAYFIRGAHTSA
LKSYQRVLELCPKSLYPMIQLAYIKLIIGQYNEAKKDFEQILINKSCYIPALKGLAETCL
ALAKDYTAKQLLGRVNDYLQQAMDSLTVAVKERKDISCLWKLLGDVCYRVAMLPDKYSHL
KASSILIKYENVEHIVLLKRIDMFSLSARCYCCALSLSPESVFLWYDLALCYLMQLQHDP
SINHKNHASKCLAAAKHAVKLCPSTWKHWNLLGIICMSPYVKNYALAQHAFVMAIDNELN
NAIVWSNLGTLYLYIGSLYKANEAYSRAQRADPAYMNSWIGQALIAEIMNRKETVDLFRH
ARQLGYHSQAAIGYTHWVLDMILNPNTKHAVLHTDATQSMHAISSAADVMTWYVENHPND
CYARNAYGLLLERQRLYKSAAEQFAVAVCNSTENEKDLVSINLARVLIRLKRYNEAIKLC
QGVANTNYNSQCSLALALFKAELYEEAYNTYEKTLHSFANTEAQKSYTLCAMAAIAYSFH
RVNDAKTLLFQCIQIQPPVIIGLLAAASLGILHSDINLAVLVLKELELCVPHPEYGHHVL
SLFAYYYLIGNDVQKAITILSKEIFRSPGNVKYWTILLRILLETDLQLFSRCAQKVLFLN
RNIITENHAHVACALSFSCFMQNMGPASIRSMQKLLFTYPASIESWAMFIAGFLSRRTMK
KYKMNVEWFVTFISNIQQSYQPAYFMAKWLNDTKIKLKQLN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaataaaagtagctcttaaagcggctcgtgatacatttagagaaaagaag
tatgtagatgtgatcaagaaatgtaacaagatattaatgagagatcaaaataattataac
gcgcttatgttattggcggctgcaatgaaagaaattgatgaatataaaccacaagtacca
ttaattctccaaaaaggtacaaaaatccaagcagacaatccattagcttggtacggttta
gtatcttactatgaaaaaaacttggacaataatgaatgttataaccaactattattagct
tactgtaagcttttggaaatagaaagtgacactaagtttacaaatattatgagtagaatc
tcaaaactttctacacaacttaaggatgttgcgactataactcgatgtattgaacattta
attgaattacggaagagtttggatgataacaaaattaaggtcattgataaaacgcttgga
tggctgctattagataatttttacaatctaaataaatatcaaaatttattagaaagtgtt
tttaaatctacagttaatgatcttgatgcaactgaccaacaaaatttttatacaaaatat
ttgaaaattttatatgacaaagatgaattaattgatttggtaaaagaagctatcaatatg
catcagcgattcccacaagatacattaccgttagaatatatatgtcttgcttacttggaa
caaagtatcttggatgaaaattttactgatgtcgatataacacagttttatgaaggttgc
ttaaaattgaacaaagagtgtgaaacagctaaaattgctaaagcacttgatttagcaaaa
tcgggcaatttgattatagcgcgagatatattgaaagatatagttgtatcaacgccgcgc
tcagtatgtggttggatggcattaaatcaaataagtatgaggctttactgttgggaagat
gcagaagtcgctgctaagagagtattagatatgaaaaaatataaaataaaaaataaatta
ttatatagaatgaaagagacattagttgaagcaacgagtttaactaatgacaaatctaaa
tgggaaactgcattccgaatgtgtgaagaaatacatccttcagcgcgattggatttgatt
cgtgcacgtcttagcatattgttatatcagccagatgtagagactctgctgaacaatttg
gaatcaaaagatgaaaccagaacacataccaatattcttcgagcgttatatttgaaacaa
aataaacaatacgacgaagctgtgaatatacttgattcagccgtccgaaaaccaggcttg
gctcaaacttcccaagcgtggttacttcttggtacaatctattgggaaatggcagaatat
aattacagcttgatggcttttttgaatgggataaaagccgatcgttttaattggaaatgt
ctagtttatttggggcagtactatcgtgactatggtaatgacatggaacgttctaggagg
tgttaccaaaccgcattacaaattaatccaaattctgaagaagctggtatcgggttaagt
acggcatacaggcttcttaaaaatcaagatgcaaatataaaattgttacaaatgttaact
gcacaaggtagcggtcctagatgggcgtggttacaactcggtttgcaatacctcgatcaa
ggaaatgcggagcaggctattaaagcgtttcaacatgttattagaactgatcccagtgat
agccactgttgggaatcgttagcggatgcgtattttataagaggtgcccacacatcagca
ttaaaatcttatcaacgagtattagaattatgcccaaaatcattatatccaatgatacaa
ttagcatatataaaattgattattggacaatataacgaagcaaagaaagactttgaacaa
atattgataaacaaatcatgttatattcctgctttgaaaggattggctgaaacctgtttg
gctttagcaaaagactatactgctaaacaacttttgggtcgtgtgaatgactatttgcaa
caagcaatggatagtttaactgtagctgtgaaagagcgtaaggatatatcttgtctctgg
aagttacttggcgatgtgtgttacagagttgcaatgttaccagacaaatacagtcattta
aaagcatcatctattctaataaaatatgagaatgtcgaacatattgtattgcttaaacgg
atagatatgttctcattatctgcaagatgttattgttgtgcattatctctttctccggaa
tcagtttttctgtggtatgatttagctttatgctatttaatgcaattacagcatgatcca
tcgatcaatcataaaaatcatgctagtaagtgtctagctgctgcaaaacatgctgttaaa
ctatgtccttcaacatggaaacattggaatcttctgggtattatttgtatgtcaccgtac
gtgaagaactatgcgttggcacaacatgctttcgtaatggcgattgataatgaattaaat
aatgctatagtatggtctaatttgggaactttatatctgtatataggaagtttgtataaa
gcaaacgaggcttattctcgagctcagcgtgcagatccggcatatatgaatagttggata
gggcaagctttaattgcagaaataatgaatcgaaaagaaacagtagatctatttagacat
gcaagacaattaggatatcatagtcaagctgccataggatacactcattgggtacttgat
atgattttaaatcccaacaccaaacatgccgttttacatacagatgcaacacaaagtatg
catgcaatatcttctgctgctgatgttatgacgtggtatgtagagaatcatccaaatgac
tgttatgctcgaaatgcatatggattattattagaaagacagagactttataagtcagct
gcagaacaatttgccgtagctgtatgtaatagtacggaaaacgaaaaagaccttgtttct
ataaatttagcacgtgtactaatacgactgaaaagatataacgaagcaataaaattatgt
caaggagttgcaaataccaactataattctcaatgcagtctcgcgttagccttattcaaa
gctgaactatatgaagaggcgtataatacatatgaaaagactctgcattctttcgcgaat
actgaagcacagaaatcatatacactgtgtgcgatggctgcgatagcatattctttccac
agagtaaatgatgcaaaaactttacttttccaatgcatacaaatacagcctccagttata
ataggtcttttagcggccgcatcattagggatattacatagcgatatcaatttagctgta
ttagtactaaaagaattggagttatgtgtacctcatcctgaatatggtcatcatgttcta
agcttatttgcatattattatttgataggaaatgatgttcaaaaagccattactattctt
tctaaagaaatctttagatctcctggtaatgtaaaatattggactatattactcaggata
ttattagaaactgacttacaactgtttagtagatgcgcacaaaaagtattgtttcttaat
agaaatattattactgaaaaccatgcacatgttgcatgtgctttatcctttagctgtttc
atgcaaaatatgggaccagcaagtattagatctatgcaaaagcttctatttacttatccc
gctagcattgaaagttgggcaatgttcattgcaggatttttatcaaggcgtacaatgaaa
aaatataaaatgaacgtcgagtggttcgtaacatttataagtaacatacaacagtcatat
cagcccgcatatttcatggcaaaatggttaaatgacactaaaataaaattgaaacagctc
aattaa
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