Bombus pyrosoma: 122573815
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Entry
122573815 CDS
T07776
Name
(RefSeq) PH-interacting protein
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpyo04121
]
122573815
Ubiquitin system [BR:
bpyo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122573815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Auxin_resp
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
122573815
NCBI-ProteinID:
XP_043596681
LinkDB
All DBs
Position
LG1:complement(3440595..3452092)
Genome browser
AA seq
1756 aa
AA seq
DB search
MEGSVTKNETAIAPELYFLIAKFLAAGPCREAADVLKRELERAKVLPQRLDWGGHVHNQT
FEELEKKYSHIGSNHLLQICARIGPVLEKEVPPCIPGAISLLGAGRQSLLRTHEDVQRQV
HGIISYSGRLGGKPFLASPYSLSVPNIVHVLQGRENSGPLGRREAIPTKFYNKMQLYRHT
LGHLSAVYCVLFDRTGKYIITGADDLLVKVWSSIDGRLLATFRGASAEIMDIAVNFDNTL
LAAGSLDRILRVWCFQTMSPVAVLSGHSGMITSVNFCPISCNGVYYLVSTSTDGSVAFWS
HTKKGNERAVFQPKPIQYHEKMRPGQAQMICASFSPGGAFMAAGSADHHVRVYAMLGDDG
PCRVLEVEAHSDTVDSIQWAHNGLKFISGSKDGTANVWHFEQQQWIYKRLLMITKLPGES
ETEDDSNKKAKVTMVSWDVSDEWVITAVNDSCLKVWNAKSGELVKILRGHKDEVFVLESH
PIDPRVILSAGHDGQLIIWDVLNTEPIACFQNFIEGQGNGAVFDAKWSPDGTMLAATDSH
GHLLIYGFGSGVEKLKIVPKELFFHTDYRPLIRDANNYVLDEQTQTAPHLMPPPFLVDVD
GNPYPPALQRLVPGRENCRGEQLVPNIAVGAGGMQEVIEGLPAQEPRSNIDQLIEALAQR
QNINADAENAADEREENAAEQPVRQMASPRGSRSGLRRVGDVEGVRQSSGNWQRDNTTPW
NKPILARPMNPAIRETQFKTLHATAEMELENLKREMRKRPQPVSNTANTEGNIGSRIANR
KRNRTTRHGYRTRATRSEEQEDDEFENPDNAATTGSSASSNSNDSTAHEEDLCSDSSTSE
SSTEYSDWIADHGLNLEPPKRSKRKPVKKRSLTPPSDMDRRRNRRPRKKDIPLSTGIDDI
PEVFRPSEWLTEIIPRKAPYYPQMGDEIVYFRQGHQFYLDAVRNKKVYELGPRCEPWNKV
NIRAQEFVKVVGIKYEIRPPRLCCLKLALMDEYGKLTGENFTIKYHDMADVLDFLVLRQT
FDTALARSWSEGDRFRCMIDDGWWMGQIQSMEPLDEDFPESFFMCFRVRWDNGEYERMSP
WDLEPIDENRLPVVLGGAVPVLQEEIRTILYQPHAEEWPMGDREATCRRIIRGLDQVMSL
AIAEPFMAPVDLNAYPSYAFVVEYPIDLTTIKARFENHFYRRITSAQFDVRYLATNAEQF
NEPHSQIVKHARIVTDLCLRIIKETTELDVPAVYHQLVDTYHSSESEVDVEDAKDRPSTS
TQRATSSRNLRSQEASADWKVACRQLLETLWQCEDSIPFREPVDRLEHPDYHQIIDTPMD
LRTVKEDLLGGNYETPIEFAKDMRLIFTNSRNYNTNKRSRIYSMTIRLSAMFEEHMGRII
SNWKSARRRNNNAKNTKGKAKRGKVRLTNGTAPSKSKSACSDDDDEINSEDDDLDEVEKN
NSNMCAPGPSRMTNGHTKRSATATRPTLKLRISRSAVPKKPKESGSEASDSEASTESESS
GSVPVRRTRARKTVPSVSADSDSGEVYTPSGRGKQTRKNRAKNTRNSKQVKSKSKLNFYE
NSKNDKYDEDEAYSANELSDEESEEEVINRSRTRSRKLASTPDHNESLKNTTKSGRNNIE
SQSEEEEEEEEEDEEEEEEEEQSQNEINNQDSDSEESDKGFVSSRSQRRIRGTREIQNQE
TVQNSRRTGKRPRYNEESDESNTMPVRNRRKIKRRYYAEESDESPEPENVPRISISSRGR
VRKMTERARAFLLDSP
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagcgtaacgaagaacgagactgcaatagcaccagagctgtacttcctaatt
gctaaattcttagcggcgggaccttgtcgcgaagccgcagacgtgttgaagcgtgaattg
gagcgagctaaggttttaccgcaaagactagattggggagggcatgtacataatcaaacc
tttgaagagttggaaaagaaatattctcatattggatcaaatcatttattacaaatatgt
gccagaattggaccagtattggaaaaagaggtaccgccatgcataccaggagcgatatct
cttctaggagctggcagacaatctttgttacgtacacacgaagatgtccaacgtcaagtg
catggcattatttcatattctggcagactaggtggaaaaccatttttggcttcaccttat
agtttatcagtgcctaatatagtacatgtacttcagggaagggagaattcagggcctcta
ggtcgacgggaggcaataccaacaaagttttacaataaaatgcagttgtatagacacaca
ttaggacatttatctgcagtatattgtgttctttttgatcgcactggaaaatatataata
actggtgcagatgatttactcgttaaagtatggagttctattgatgggcgattattagca
acttttcgaggagcatctgctgaaattatggatattgcagtaaattttgataacacttta
cttgctgctggtagcctagaccgaatactaagagtttggtgttttcaaacaatgtctcct
gttgcagttctatctggacactctggtatgattacatctgtaaatttttgtcctatatct
tgtaatggcgtatattatttagtttctacaagtacagatggatctgttgctttctggtct
catacaaagaaaggcaatgaaagagcagtttttcaaccaaaaccaattcaataccatgaa
aaaatgcggcctggtcaagcacaaatgatatgtgcgtcatttagtcctggtggtgcattt
atggctgctggttctgcagatcatcatgttagagtgtatgcaatgttaggagatgatggt
ccatgtagagttttagaggtggaagcacattctgatacagttgatagtattcaatgggca
cataatggtttaaaatttatttcgggttctaaagatggtactgcaaatgtttggcatttt
gaacaacagcaatggatatacaaacgtttgttgatgattacaaaacttcctggagaatca
gaaacagaagatgattctaacaaaaaggctaaggtgactatggttagttgggatgtaagt
gatgaatgggttattacagctgtaaatgatagttgtcttaaagtatggaatgcaaaatca
ggtgaactggtgaaaattttacgtggacataaagatgaagtttttgtgttagaatctcat
cccatagatccccgtgttatattaagtgctggacatgacggacaacttataatttgggat
gttctgaacacagaaccgatagcatgctttcaaaattttattgaagggcaaggtaatggt
gctgtttttgatgcaaagtggtctccagatggaacaatgttagcagcaacagattctcat
ggacatcttttaatatatgggtttggatctggcgtagaaaaacttaaaatagtacccaaa
gaattatttttccatacggattatagacccttaatacgagatgcaaataattacgttttg
gatgaacaaacacaaactgcacctcatttaatgcctccaccatttttagtagatgttgat
ggaaatccttatcctccagctctgcaaagattggttcctgggagagaaaactgtagagga
gaacaattagtaccaaatattgcagtaggtgctggagggatgcaagaagttatagaagga
cttccagctcaagaaccacggtccaatattgatcagttaattgaagcacttgcacaaaga
caaaatattaatgctgatgcagaaaatgcagctgatgaaagagaagaaaatgcagcagag
caaccagttcgtcaaatggctagtccgcgaggaagcagatctggtttaagaagagttgga
gatgtcgaaggtgtacgacaaagtagtggtaattggcaaagagataatactacaccttgg
aataagcctattcttgctcgacccatgaatccagctattagagaaacacaatttaaaact
ttacatgcaacagcagaaatggaacttgaaaatttgaaacgcgaaatgcgaaaaaggcca
caaccagtatcaaatactgccaataccgaaggtaatataggtagtcgaatagcaaatcga
aaacgcaatagaactactagacatggatatagaactagagctacgcgtagtgaagaacaa
gaagatgatgagtttgagaatcctgataatgcggcaacaacaggaagttcagccagtagt
aatagtaatgattctactgctcatgaagaagatttgtgttctgatagttcaacgtcagag
tctagtactgaatattcagattggattgcagatcatggtttgaatttagaaccaccaaag
cgaagtaaacgcaaacctgtaaaaaaacgatctcttacaccaccaagtgatatggacaga
aggcgtaatagacgtcctagaaaaaaggatattccgttgtctactggcattgatgatatc
ccagaagtttttagaccttcagaatggcttaccgaaataataccaagaaaagctccatat
tatcctcaaatgggtgatgaaatagtatattttcgacaaggtcatcaattctacttagat
gctgttaggaataaaaaagtatatgaacttggtccacgatgtgaaccatggaataaagtc
aatataagagcacaggaatttgtaaaagtagtaggtataaagtacgaaatacgtccacct
cgactatgctgtttaaaattggcgttaatggatgaatatggaaaattaacgggagaaaat
tttactattaaatatcacgatatggctgatgtgttagattttttagttttacgtcaaaca
tttgacacagctttggcacgtagttggtctgaaggagaccgatttcgttgcatgattgat
gacggatggtggatgggtcaaatacaatcaatggaacctttagacgaagattttccagaa
tcgtttttcatgtgtttccgtgtcagatgggataatggcgaatatgagagaatgagtcct
tgggatcttgaaccaattgatgaaaatagacttccagtagtacttggaggtgcagttcct
gtgcttcaagaagagatacgtacaatactatatcaacctcatgcagaggaatggccaatg
ggagatagagaagcaacatgccgcagaattatacgtggactagatcaagtgatgagcctt
gcaattgcagaaccttttatggcgcctgttgatctcaatgcatatccttcgtatgcattt
gttgtggaatatcctattgatctaacaaccataaaagctcgttttgaaaaccatttctat
cgaagaataacatccgcacagtttgatgtcagatacttagcaacaaatgcagaacaattt
aatgaaccacatagtcaaatagtaaagcatgcaagaatagttaccgacctatgtctacgt
attataaaagaaactacagaattagatgtaccggctgtttatcaccaactggttgacaca
taccattcttctgaatcagaagttgatgtagaagatgcaaaggatagaccttcaactagc
actcagagagcaacctcgagcagaaatttacgttcacaagaagcatcagctgattggaaa
gtagcatgtcgtcaattattagaaacgttatggcaatgtgaagattctattcctttcaga
gaaccagttgatagattagagcacccagattatcatcaaattatagatacaccaatggat
ttacgtacggtaaaagaggatttattgggaggaaattatgaaactcctatagaatttgcc
aaagatatgcggttaatatttacaaatagtagaaattataatacgaacaaacgatcaagg
atatattcaatgacaataagattatcagccatgtttgaagagcatatgggaagaattatt
tcaaactggaaatctgcaagaagacgcaataataatgcaaaaaatacaaaagggaaagct
aaaaggggcaaagttcggttaacaaatggcactgcaccttcaaaatcaaagtctgcttgt
tcggatgatgatgatgagataaatagtgaggatgatgatttagatgaagtggaaaagaat
aattctaacatgtgtgcaccagggccatcacgtatgacaaatggacatacgaaacgttct
gctactgcaacgcgacctacgctaaaacttcggatatctagatctgcagtacctaaaaaa
ccaaaagaaagtggaagcgaagccagtgactcagaagcttccacagaaagtgaaagtagt
ggtagtgtacctgtaagaaggacacgagctagaaaaacggtacccagtgttagtgctgat
agtgattctggggaagtatatacacccagtggacgtggaaaacaaactcggaaaaatcgt
gcgaaaaataccagaaatagtaaacaagtaaagtcgaagtcaaagctaaacttttacgaa
aactcaaagaatgataagtatgatgaagatgaagcatattctgcaaatgaattatcagat
gaagaaagtgaagaggaagttattaatagaagcagaacgagatcacgaaaattagcatct
acgcccgaccataatgaaagtttgaagaatacgacaaaaagtggaagaaataatattgaa
agtcagagtgaggaagaagaggaagaggaagaagaggacgaagaagaagaagaagaagaa
gaacagtcgcaaaatgaaattaataatcaggattcagatagtgaagaatcagacaaaggt
tttgtatcatcaagatctcaaagaagaattcgtggaacaagagaaatacaaaatcaagaa
actgtacaaaattcaagaagaactggaaaacgacctcgctataatgaagaaagtgatgag
agcaatacgatgccagttagaaatcggcgtaaaattaagcgtcgatattatgcagaagaa
agtgatgaaagtcctgaacctgaaaatgtaccacgtattagtataagtagtagaggacgc
gtgcgcaaaatgacggaacgtgcacgggcttttctgttagattcaccctaa
DBGET
integrated database retrieval system