Bombus pyrosoma: 122574774
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Entry
122574774 CDS
T07776
Name
(RefSeq) transient receptor potential-gamma protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
122574774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bpyo04040
]
122574774
Ion channels [BR:
bpyo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122574774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank_3
Ank
Ank_4
Ank_5
Holin_BhlA
DUF6744
Motif
Other DBs
NCBI-GeneID:
122574774
NCBI-ProteinID:
XP_043598709
LinkDB
All DBs
Position
LG2:8412408..8513122
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AA seq
1190 aa
AA seq
DB search
MDINTIRGWNSGARSGFLRGIGQRVSFDPEAPPLPPQPARKVDEKVKRHSIHGMIEEENV
VRPHQEMASLSYQEKKYLLAVERGDVASVRRMLQSAHETEMNINCVDPLGRSALLMAIDN
ENLEMVELLIEHKVDTKDALLHAISEEFVEAVEVLLEHEESLHRNGEPHVSRFHRLVYSW
EALPSDTATFTPDITPLILAAHRDNYEIIKILLDRGSTLPMPHDVRCGCDECVTSRREDS
LRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKCEYQELRRQCQ
DFATALLDHTRSSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFVAHPNVQQL
LASIWYEGLPGFRRKNMVLQALEIVRIGVLFPFFSVAYIIAPHSVVGQTMRKPFIKFICH
SASYFTFLFMLILASQRIESVIGNWMGHDVIEHEPAPTKRGAAPTIVEWFILAWVSGLIW
SEVKQLWDVGLEEYVNDMWNVIDFVTNSLYVATAALRVVAYYRVQKETQKSGSMIELQRE
QWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLV
LFAFSCGLNQLLWYYADMEKKRCPTAMAYSGNTNVTTDSNACIVWRRFANLFETAQTLFW
AVFGLVDLESFELDGIKAFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADI
EWKFARSKLWISYFEEGGTAPPPFNIIPTPKSVWYMGQWLYRKLCGHSRAAKKEHMRTIR
RKVKQASERDFRYQSIMRNLVRRYVTVEQRKAESEGVTEDDVNEIKQDISALRCELIEIL
KNSGMNTSTASGAGTDGSLKELSIGAGGKKNRQKERRLMKGFNIAPQPSGSGSLPPVDEF
TASLQQVQQENSHEIFGSTLSGIFGPGATPKKSPHHISTNSVPGLGTSRQSRRIRGSSKK
KRWENLIEAAKVRGRVSRLIGRSRSEDSVYSPASEDGGSRSEGSTDSKSSLETPGPEVQA
THHSHHAHHSHHHEGHHMFAHGLGALVALRKKRKNFSDSRATSGMRSSSGTSPIYPITSV
LVSKVSKKQQLQRASSVPARGPELGQQPIPPRRHEGTQSQQPSIDTPEGVNVNEQPVVPA
APLTPSTTEESVVASSSLPATMKRNGSATQLQRLPGIEPISGHDVSGGWL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatattaacacgatcaggggttggaactcgggcgcgaggagcggtttcctacggggc
atcgggcagcgcgtgagcttcgaccccgaggcaccgccgctgccgccgcaacctgcaaga
aaggtcgatgaaaaggtcaagaggcacagtatccacggcatgatagaggaagagaacgtg
gtgagaccgcaccaggaaatggctagtctgtcctatcaagagaagaagtaccttctcgcg
gtggaacgtggagatgttgcttctgtcagaaggatgttgcagagtgctcacgaaaccgaa
atgaacatcaactgcgtggatccattgggacgttcggcgcttttaatggcgatcgataac
gaaaatctggaaatggtggagctgctgatcgagcataaagtcgacacgaaggacgcgttg
cttcacgccatctccgaagaattcgtcgaagcggtcgaggtacttctggaacacgaggaa
agtcttcatcgaaacggggagccacacgttagtcgctttcatcgtctagtatatagctgg
gaagcgctgccatcggacaccgcaaccttcacaccagacattacacccctaatcttagcc
gctcatagggataactacgagatcattaagatcctgctggaccgcggatccacgttacct
atgccacacgatgttcgttgcgggtgcgacgagtgtgtaacatcgaggagagaggattct
ctgaggcattccaggagccgaataaacgcatacagagctctagcatcgccgtccttgatc
gctctttcctcaaaggaccccatcctaactgcgttcgagctctcttgggaacttcggcga
ctttcgttcctcgagcacgaatttaagtgcgaatatcaggagcttcgaagacaatgccaa
gactttgctactgctttactggatcacactagaagttcctacgagctggaggtgctccta
aatcacgatcccaccgggccagcgttcgagcacggcgaaaggatgcatctgaaccggctg
aaactcgctattaaacttcggcagaaaaagttcgtggcgcatcccaacgtgcagcagtta
ctcgcatcgatttggtacgaaggtcttccaggcttccgaaggaaaaacatggtcctccag
gcgctggagatcgtcaggatcggcgtcctctttcctttcttcagcgttgcatacatcatc
gcgccccacagcgtggtcggccagactatgaggaaaccgttcatcaagttcatctgtcac
tcggcctcgtatttcacttttcttttcatgttgattctggctagtcaaaggatagaaagc
gtgatcgggaactggatgggtcacgatgtcatagagcacgaaccagcaccgacgaaaaga
ggcgctgctccaacgatcgtcgaatggttcatcctggcctgggtatccggcctgatttgg
tccgaagtgaagcagttgtgggacgtcggcctcgaggagtacgtgaacgacatgtggaac
gtgatcgacttcgttaccaactccttatacgtagctacggccgcgctcagggtggtcgct
tactacagggtgcaaaaagaaactcagaagtccggatccatgatcgagctgcaacgcgaa
caatgggatacgtgggatccaatgctcatatccgagggccttttctccgccgccaatata
ttcagctctctgaaactcgtctacattttctccgtaaatcctcacctcggtccactgcaa
gtctccctgtctaggatggtgatggacatcatgaagttcttcttcctctatgtgctggtg
ctattcgccttctcctgcggtctaaaccagctgctatggtactacgcggatatggagaag
aaacggtgcccgaccgcgatggcttattctggtaacaccaacgtcacgaccgattcgaac
gcttgcatcgtttggcgtagatttgcaaatttgttcgaaaccgcgcaaacgctattctgg
gccgtgttcggactagtcgacctcgagagcttcgaactggatggcataaaagcgttcacc
aggttctggggcatgctgatgttcggcacgtactcggtgatcaacatcgtcgtactattg
aatctattaatcgccatgatgaaccattcctatcagttgatctctgaacgtgccgatatc
gaatggaagttcgccaggagcaaactctggatcagctatttcgaggagggtggcacggct
ccaccaccgtttaacatcatcccgactccgaagagcgtttggtacatgggccaatggttg
tatcggaagctgtgtggccatagcagagctgccaagaaggagcacatgagaacgatcaga
agaaaagttaagcaagcatcggaaagagactttaggtatcaaagtattatgaggaatttg
gtgagaaggtacgtgacggtggagcaaaggaaagcagagagcgagggtgtgacagaagac
gacgtgaacgagattaaacaagatatcagcgccctgagatgcgaattgatcgagatttta
aagaattccggcatgaacacgtccacagccagtggcgctggaactgacggtagccttaaa
gagctgtccataggtgcggggggtaagaagaatcgtcagaaggagcggcgtctaatgaag
ggattcaatatcgcccctcaacccagtggaagtggcagtctaccgccggttgacgaattt
acagcgtcgctgcaacaagtgcagcaggagaactcccacgagatatttggttcgaccttg
agcgggatatttggaccaggcgccacaccgaagaagagtccacatcacatcagtactaac
agcgttccgggactcggtacgagcagacagagtcgcagaattaggggaagttccaagaag
aagaggtgggaaaaccttatcgaggcagctaaagttcgaggcagagtctcgaggttaatc
ggtagatctcgttcagaggattccgtgtactcgcctgcttctgaagatggtggttcaaga
tcggaaggatcgacggactcaaaatcatcattggagacccctggacccgaagtccaggcc
acgcaccattcccatcacgcgcatcattcgcatcatcacgaaggacatcacatgttcgct
catggtctaggcgcgctggtggcactccgaaagaaacggaagaacttctcagactccagg
gcgacttcgggaatgaggagcagcagcggtacgagtccgatatacccgatcacctcggtt
ctcgtttcgaaagtatcgaagaaacaacaactacagagagccagcagcgtacctgctaga
ggaccggaattgggccaacagccgattccaccgaggagacacgaaggcacgcaaagtcag
cagcctagtatcgacacacctgagggtgtcaacgttaacgagcaacctgtggttccggct
gctccgctgacaccatcaacgacggaggagagcgtggtcgcgagcagttctctcccagcg
accatgaaaaggaacggatcagcgacgcagctacagcgacttccgggtatcgagccgata
tccggccacgatgtatccggaggatggctctga
DBGET
integrated database retrieval system
