Bombus pyrosoma: 122577344
Help
Entry
122577344 CDS
T07776
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
122577344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bpyo04040
]
122577344
Ion channels [BR:
bpyo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122577344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
122577344
NCBI-ProteinID:
XP_043604565
LinkDB
All DBs
Position
LG18:2258935..2273607
Genome browser
AA seq
1116 aa
AA seq
DB search
MNPSESQQNLLANEARAPSVQSLNPPSDYSLGPVEKHFLLSAERGDCATVKRLLEENKDH
PEILNINCVDPLNRSALIAAIENENVELIRLLLDLGIQVKDALLHAIKEEYVEAVEILLE
WEEKIHEPGQPYSWEAVDRSSSNFTPDITPLILAAHKNNYEILKILLDRGATLPTPHDAR
CGCDECVTSSEQDSLRHSQARINAYRALTSPSLIALSSRDPLLTAFELSWELRRLSHMEQ
EFRFEYNEMREQTQNFATALLDHARTSLELEIMLNYNPHGENWEPGERQTLDRLKLAIKY
KQKQFVAHPNVQQLLAAIWYDGLPGFRRKSMIGQFIEIGKLGAMFPVYSTIYMLSPTSPM
GLFMKKPFVKFICHSSSYAFFLMLLGMASQRIEYLVIELFGNAWMHEILAGWKRRERGCI
PGFVESGVIIYVISLVIGEMRSLWSDGLLEYISDLWNIVDFVQNMFYVIWVMLRVTAWIV
VQREYWNGLDPWYPRDQWHAFDPMLLSEGAFAAGMIFSFLKLVHIFSVNPHLGPLQISLG
RMIIDIIKFFFIYTLVLFAFGCGMNQLMWYYADLEKQKCYHMKDFPDLPDFDNQEKACSI
WRRFANLFETSQSLFWASFGMVDLMSFDLTGIKSFTRFWALLMFGSYSVINVIVLLNMLI
AMMSNSYQIISERADTEWKFARSHLWMSYFEDGDTVPPPFNMVPTGKTFNRIIKCGKTGR
QTRSLIKKSREKALARHDTVMRLLIRRYVTAEQRKRDEFGITEDDVMEIRQDISTLRYEL
IDILRQNGMRTPTIDKQDAALSGKKGRVMERRLQKDFQIGIVEGIVNAVIQSEKEPKDVF
SQIAKAIGRKSSGSKKKDWNAMVRKNTFAKDPIGSTTEATMKQTRRSIRRHLQTQNSDLA
SLDPNRLVDYNPNLLEVSPTTRIAYAKFMIGRARPIPEQKEEGESKNDVEGSQKSVRIVT
EPVHATPILKKTLLKSLSSTSLEKGGEKAVSIEVRAPSPIPEDPKEGEVGNSPQGKAGLA
KNPTDTKPLSEKEKGDRKNTEDEEKKKREEEEKKKKEMEGEKKKKEEEKKKDEGEKKKES
SSEPSKPAAAEDNVPVATTKLRGKSKATGQIMGGWI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcagagtcgcagcagaatcttctcgcgaacgaggcgagagcgccatcggtg
caatctttaaacccgccctcggactacagtcttggcccagttgagaagcacttcctgctc
agcgcggaacgaggtgattgtgccactgtcaaaagactattggaagagaacaaggatcat
ccagagatcctcaacatcaactgcgtggatcctcttaaccgatccgctcttatcgccgcc
attgagaacgagaatgttgaactcatcagactacttctcgacttaggcatacaagtgaag
gatgcactcttacacgccataaaagaagagtacgtggaagctgtggagatccttctcgaa
tgggaggaaaaaatacacgagcctggtcaaccttacagttgggaagctgtagacagatca
tcgtcgaactttacaccagatataactccactgattttggcagcacataagaacaattac
gaaattctaaaaatcctcctagatcgtggtgccacacttcccactcctcatgatgccaga
tgtggttgcgacgagtgcgtgacatccagcgaacaggattctttgagacattctcaggcg
cgaataaacgcgtatcgcgcgcttacatcaccatctttaatcgccttatcatcgagggac
cctcttctcaccgctttcgaactctcctgggagcttcgtcgtttgagtcatatggaacaa
gagtttcgtttcgagtataatgagatgcgggagcaaacacaaaattttgctacggccctg
ttggatcacgctcgtacctctctggaattggagataatgttgaattataatccgcatggc
gaaaactgggaacctggagaaagacaaaccctggatcgactcaagcttgctattaaatac
aaacagaaacagttcgtggctcacccaaatgttcaacaattattggctgctatctggtac
gacggtttgcctggctttcgaagaaaaagtatgatcggacagttcatagagatcggaaag
cttggagcgatgtttccagtgtacagcacaatctacatgctctcgccaacgtcaccaatg
ggtctgttcatgaagaaacctttcgtcaaattcatctgtcactcctcttcctatgcgttc
ttcttaatgcttctcgggatggcgtcacaacgtatcgagtacctggtaatcgaattattt
gggaacgcctggatgcacgagatactggccggatggaaaagacgggaacgtggctgcatt
cctggtttcgtcgaatccggtgtcatcatctacgtaatcagtctggtaataggcgaaatg
agatcattatggtcggatgggttgctggagtacatatcagacctttggaacatagtggac
ttcgttcagaatatgttttacgttatttgggtaatgttacgagtaaccgcatggattgta
gttcagagggaatactggaatggtctagatccttggtatcccagagatcaatggcacgcc
ttcgaccctatgcttctttctgagggagccttcgcggctggtatgattttcagttttttg
aagctagttcacatattcagcgtgaaccctcacctcgggccacttcaaatttccctgggg
aggatgataatagacattatcaagttcttcttcatttatactctggtgctgttcgccttt
ggctgcggaatgaatcaactaatgtggtattatgcggatttggagaaacaaaagtgttat
catatgaaggactttcctgatctacctgattttgataaccaggagaaggcttgttcgatt
tggagacgtttcgccaatttgttcgagacatcgcaatcgcttttttgggccagtttcggt
atggtagatctgatgtcgtttgatctaactggaataaaaagcttcactagattctgggcg
cttcttatgttcggttcttactccgtcataaacgttatcgtgttactgaacatgcttatt
gccatgatgtctaattcctatcaaatcatctcggaaagagctgacactgaatggaaattc
gccaggagtcacttatggatgagttacttcgaagatggtgacactgtgcctcctccattt
aatatggttccaaccggcaaaacgttcaataggatcatcaagtgcgggaagaccgggcgg
caaaccagatctttgattaaaaagtccagagaaaaagcgttggcaagacatgacacggtg
atgcgattactcatcagacgttatgtaactgcggaacaaaggaaacgagacgagttcggt
atcaccgaagacgatgtaatggagatcagacaggacatttccacgttacgatacgagctt
attgatatacttcgacaaaatggaatgagaacaccaacgatcgataaacaggatgccgca
ctatctggcaagaaaggtcgtgtgatggaacgtcgactgcaaaaggacttccagatcggt
atagtggagggcatcgtgaacgccgtgattcagagtgagaaggaacctaaagatgtgttc
agtcaaatcgcgaaggctattggtcgcaagagtagcggaagcaagaagaaagactggaac
gccatggtccggaagaacactttcgcaaaggatcctattggtagcacgaccgaggccact
atgaaacaaacgcgacgcagtatacgtaggcacttacaaactcagaattcggacttggcc
tcgttagatcctaatcgtttggtggattacaatcctaatctattggaagtatcaccgacc
acgaggatcgcctacgcgaaattcatgataggtcgggcaagacctattccagagcaaaag
gaggagggggaaagtaagaatgatgttgaaggatcgcaaaaatccgttcgaattgtaacc
gagcctgtccatgcaacgccgatcttgaagaagactctactaaaatctttgagcagtact
agcttggagaaaggtggagagaaagcagtttcgatagaagtgagggcaccgtcgccgatt
cccgaggatcccaaggaaggagaggttggaaattcacctcagggcaaagctggtttagcg
aaaaacccaacagatacaaaaccattgtcggaaaaagagaaaggagataggaagaacacc
gaagacgaggagaaaaagaaaagggaagaagaagaaaagaagaaaaaggaaatggaaggg
gagaagaagaagaaagaggaagaaaagaagaaggatgaaggagaaaagaaaaaggaatca
agcagcgagccatcaaaacctgcggcagcagaagataatgttccggtagctaccacaaaa
ttgaggggaaaatcgaaggcaactggccaaataatgggtggatggatttaa
DBGET
integrated database retrieval system
