Burkholderia pyrrocinia: ABD05_06495
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Entry
ABD05_06495 CDS
T03962
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bpyr
Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpyr03016
]
ABD05_06495 (gidA)
03036 Chromosome and associated proteins [BR:
bpyr03036
]
ABD05_06495 (gidA)
Transfer RNA biogenesis [BR:
bpyr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ABD05_06495 (gidA)
Prokaryotic type
ABD05_06495 (gidA)
Chromosome and associated proteins [BR:
bpyr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ABD05_06495 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
DAO
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AKL99878
UniProt:
A0ABZ3BGS2
LinkDB
All DBs
Position
1:1412307..1414277
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AA seq
656 aa
AA seq
DB search
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL
FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA
VSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQ
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP
EGLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET
KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVT
RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDVRWDAFSRKRDAVSRETER
LKSTWVTPKTLPPEEATALLGKAIDHEYSLADLLRRPGIGYDGVCGLKGGECGPAEPLAD
DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL
NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGTAAEATEQGDGAVPTQQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcccacagaatttgacgtcatcgtcgtcggtggcggccacgccggcacggaa
gccgcgctggcgtccgcccgaatgggcgcgaagacgctgctgctgacccacaacatcgaa
acgctcgggcagatgagctgcaatccgtcgatcggcggcattggcaagggccatctggtc
aaggaagtcgacgcgctgggcggcgcaatggccgccgcgacggacgagagcggtattcag
ttccggatcctcaattcgtcgaaggggccggccgtgcgtgcgacgcgtgcgcaggccgat
cgcatcctgtacaaggccgcgatccgccaccggctcgagaaccagccgaacctgtggctg
ttccagcaggccgtcgacgacctgatggtcgaaggcgatcgcgtggtgggcgccgtcacg
cagatcggcatccgcttccgcgcccgcgcagtcgtgctgaccgcgggtacgttcctcgac
ggcaagatccacgtcggcctgaacaactacacgggcggtcgcgcgggcgatccggcggcc
gtgtcgctgtcgtcgcgcctgaaggagctgaagctgccgcagggccgcctgaagaccggt
acgccgccgcgtatcgacggccgtacgatcgacttctcgaagctggacgagcagccgggc
gacctcgatccgatccccgtgttctcgttcctgggccgtgcggagcagcatccgcagcag
ttgccgtgctgggtcacgcatacgaacgagcgcacgcacgacatcattcgcggcggcctc
gaccgttcgcctatgtatacaggcgtgatcgaaggcgtcgggccgcgttattgcccgtcg
atcgaggacaagatccaccggttcgcatcgaaggaatcgcaccagatcttcctcgagccg
gaagggctgacgaccaacgagttctacccgaacggaatctcgacgagcctgccgttcgac
gtccagctcgagctcgtgcattcgatgcgcggcctcgagaacgcgcatatcctgcgcccc
ggctacgcgatcgagtacgactacttcgacccgcgcgcgctgaaggcgtcgctcgagacg
aaggcaatcaacgggctgttctttgcgggccagatcaacggcacgaccggctatgaagaa
gcggccgcgcaaggcctgctggccggcctcaatgctggccgctacgtgcaggagaaagac
gcatggtgcccgcgccgcgaccaggcataccttggcgtgctggtcgacgatctcgtgacg
cgcggtgtggccgagccgtaccggatgttcacgagccgcgccgaatatcggctgagcctg
cgtgaagacaacgccgacatgcgcctgaccgagatcggccgcgaactgggcctcgtcgac
gacgtgcgctgggacgcattcagccggaagcgcgacgctgtttcacgtgaaaccgaacgc
ctgaagtcgacgtgggtcacgccgaagacgctgccgccggaagaggcgaccgcgctgctc
ggcaaggcgatcgatcacgaatacagcctcgccgatctgctgcgccgtccgggcatcggc
tatgacggcgtgtgcggcctgaagggcggcgaatgcggcccggccgagccgctggcggac
gatccggtgctgctcgagcagatcaaggagcaggtcgagatcggcatcaagtatcagggt
tatatcgagcgccaggcatccgagatcgagcgcaacgacgcgaacgagaacacgcgtctg
ccggacggtatcgattaccgcgaagttcgcggcctgtcgttcgaggtgagccagaagctc
aacgagttccggccggaaacgatcgggcaggcgtcgcgcatttcgggcgtcacgccggcg
gcgatctcgctgctgatggtgcacctgaagcgccgcggcctgggccgtcgtaatggcact
gccgcagaggcaacggagcagggggacggcgccgtcccgacgcaacaatga
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