Burkholderia pyrrocinia: ABD05_29210
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Entry
ABD05_29210 CDS
T03962
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00100
Steroid biosynthesis
bpyr00909
Sesquiterpenoid and triterpenoid biosynthesis
bpyr01100
Metabolic pathways
bpyr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
ABD05_29210
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
ABD05_29210
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpyr01006
]
ABD05_29210
Enzymes [BR:
bpyr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
ABD05_29210
Prenyltransferases [BR:
bpyr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
ABD05_29210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AKM04122
UniProt:
A0A0G3WZI9
LinkDB
All DBs
Position
2:complement(2948178..2949242)
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AA seq
354 aa
AA seq
DB search
MTTRTDSAYLLGDLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDEVERLGDGAALSRSLDDVTRMQTDSHEHVLLGSMEPMLALLRAQPDADRA
SIRKVVATLTSGMEFDLRTFPDEQSGQVASLPTRAMLDRYTYLVAGCVGEFWTDMTGAHT
GAARGLDLPDMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLGAHGLGVAELMQP
DASVRARGVLVDLLRIALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHD
AWLDPAKPAKVPRKRIYRIMASSLTLVGSNTAIRARMTALADAVNARLASPASR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgaaccgattccgcctacctgctcggcgacctgctgaagaacgtttcccgc
tccttctacctgacgctgcgcgtgctgcccgacggcatgcgcgacccggtcggcctcgcg
tacctgctcgcgcgcgcggccgatacgatcgccgataccgcgctcgtcgcacccgatcgc
cgggcggcgttgctgaccgatctgcgcgacgaggtcgagcggctcggcgacggcgcggcg
ctgtcgcgttcgctcgacgacgtgacgcggatgcagacggattcgcacgagcacgtgctg
ctcggctcgatggagccgatgctcgcgctgctgcgcgcgcagccggacgccgaccgcgcg
tcgatccgcaaggtcgtcgcgacgctgacgtcaggcatggaattcgacctgcgcacgttc
ccggacgaacagtcggggcaggtcgcgtcgctgccgacgcgcgcgatgctcgaccgctac
acgtatctcgtcgcgggctgcgtgggcgagttctggaccgacatgacgggcgcacacacg
ggtgccgcgcgcggcttggacttgccggacatgcgcgagaagggcatccgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggacctgcgcatcggccgctgc
tacctgcccgacgacgtgctgggcgcgcacgggctcggcgtcgccgaattgatgcagccc
gatgcgtcggtgcgcgcgcgcggcgtgctggtcgacctgctgcgcatcgcgctcgaccag
tatcgcgacgcgtgcctgtatacgctcgcgatcccgcgccgcttcgtgcggctgcggctc
gcgtgcctgtggccgatcatgatcggcctcgaaacgctcgaactgctcgctggccacgat
gcgtggctcgacccggcgaagccggccaaggtgccgagaaaacgcatctaccggatcatg
gcgtcgtcgctcacgctggtcggctcgaacacggcgatccgtgcgcggatgaccgcgctc
gccgatgcggtgaacgcgcggctcgcgtcgccggcgtcgcgttga
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