Bartonella quintana RM-11: RM11_0389
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Entry
RM11_0389 CDS
T02294
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bqr
Bartonella quintana RM-11
Pathway
bqr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RM11_0389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqr03400
]
RM11_0389
Enzymes [BR:
bqr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RM11_0389
DNA repair and recombination proteins [BR:
bqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RM11_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
13563263
NCBI-ProteinID:
AFR26127
LinkDB
All DBs
Position
complement(503014..503886)
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AA seq
290 aa
AA seq
DB search
MFGLPINGLIIRKNTMFNQSQYSISYEELLSFYKESGVDAVLSDVPIDRFSQASSSTQEL
KKVIDTPHHQSVSPTIKQHSYPLPHSSTIQREPSAIEIAKGANTLDELKSALLAFNGCSL
KLTAKSTCFSDGTAGSPLMIIGEAPGREEDIQGIPFVGKAGMLLNKILASIGLTRKNVYI
ANTIPWRPPGNRTPTPREVALCRPFIERQIYLANPRILIALGGVAMQFLTGSQNGIIRTR
GKWCTYESEDNIKIPVMPTFHPAYLLRTPSQKKLTWKDFLEVKNRLNNLL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgtttggtttaccgataaatggattaatcataagaaaaaatacaatgttcaaccaaagt
cagtattcaatctcgtatgaagaacttctaagcttctacaaagaaagtggtgttgacgcc
gtgctcagtgatgtacctattgaccgttttagtcaagcttcttcttcaacgcaggagtta
aaaaaggtaatcgacactccccatcaccaatcggtatcaccaaccataaagcagcatagc
tatccactgcctcactctagtactatacaacgtgaaccttcagctatagagatagcaaaa
ggtgcgaatacacttgatgaattaaaatctgctctccttgcgtttaatggttgctcatta
aaattgacagcaaaaagtacctgtttttcagatggaacagcaggaagccctctcatgatc
ataggagaagctccaggacgagaggaagatatacaaggaattccatttgtaggaaaggca
ggaatgttgcttaacaaaatccttgcatcaattggcttaacaagaaagaatgtctacata
gccaacacgattccctggcgtccaccaggaaatcgcacaccaacaccaagagaagtggca
ttatgccgccctttcattgaacgacaaatttatttagctaatcctcgtattcttatagca
ctgggaggagttgctatgcagtttctgactggctctcaaaatggaattatccggacacgg
ggaaaatggtgtacctatgaaagcgaagacaacataaaaatacctgttatgccaaccttt
caccccgcttaccttctccgaactccgagtcaaaaaaaacttacatggaaagatttctta
gaagtcaaaaaccgtttaaataatctcttgtaa
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