Bartonella quintana RM-11: RM11_0675
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Entry
RM11_0675 CDS
T02294
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bqr
Bartonella quintana RM-11
Pathway
bqr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RM11_0675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bqr03021
]
RM11_0675
03400 DNA repair and recombination proteins [BR:
bqr03400
]
RM11_0675
Enzymes [BR:
bqr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RM11_0675
Transcription machinery [BR:
bqr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RM11_0675
DNA repair and recombination proteins [BR:
bqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RM11_0675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Terminase_2
Motif
Other DBs
NCBI-GeneID:
13563548
NCBI-ProteinID:
AFR26402
LinkDB
All DBs
Position
complement(848089..852240)
Genome browser
AA seq
1383 aa
AA seq
DB search
MAQTLAMTSQFNGRKRVRKFFGKIPEVTEMPNLIEVQKASYDQFLMIEEPKGGRPDEGLQ
AVFKSVFPISDFSGTAMLEFVGYEFDLPKFDVEECRQRDLTYAAPLKVILRLIVFDVDED
TGSKDIKDIKEQGVYMGDMPLMTTNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSG
KFLFAARVIPYRGSWLDIEFDAKDIIYARIDRRRKIPITSLLMALGMDASDILSTFYNKV
TYERDGDGWRIPYSVGRFKGVKLISDLVDADSGEVVAEAGKKLTVRAAKALAEKGLKAVK
ITEDDLLGSYLAEDIVNYQTGEIYLEAGDEIDEKALKILFDVSADQINILDIDHMNIGAY
IRNTLKVDKNESQQDALFDIYRVMRPGEPPTMDTAAAMFHSLFFDPERYDLSAVGRVKMN
LRMDLDCPDTVRILRQEDILAVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRI
GLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGF
IESPYRKIIDGKVTTEVIYLSAMEESKHYVAQANSSLDAEGRFTDEFVVCRHAGEVLMAP
RDHVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMES
IVARDSGAAVSAKRGGIVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQSTCINQ
RPLVHVGDRVEKGNIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDV
FTSIHIEEFEVAARDTKLGPEEITRDIPNVAEESLRNLDEAGIIYIGAEVQPGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGAFGTVVEVRVFNRHGVEKDERAMA
IEREEIERLAKDRDDEQSILDRNVYARLTDMLTGKIAVEGPKGFSKGKKLDNTIMGHYPR
SQWWQFTVEDEKLQSEIEALRKQYDESKEALQRRFMDKVEKVQRGDEMPPGVMKMVKVFV
AVKRKIQPGDKMAGRHGNKGVVSRILPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILE
THLGWACAGMGKKIGDLVDLYQETGDIFPLRQRIENLMPDNDHNEPVRQYDNESLYKLAL
QMRKGVSIATPVFDGAHEADINMMLEDADLDSSGQVVLYDGRTGEPFDRPVTVGYIYMLK
LHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK
SDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLALNVELDDARELIAQRVLSDT
TEQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctagcaatgacgtctcaattcaatggtcgtaagcgcgtacgcaagttt
tttggtaagattcctgaagtgacggaaatgccaaatcttattgaggttcaaaaagcatca
tatgatcagtttctcatgattgaggagccgaaaggtgggcgtccagatgaaggcttgcag
gctgtgtttaaatcggtatttcctatttcggatttttccggtacagctatgctcgagttt
gttggttatgaatttgatttaccaaaatttgatgttgaagaatgccgtcaacgtgatttg
acttatgctgcgccattaaaggtgatattgcgtttaatcgtttttgatgttgatgaggat
actggttcgaaagatatcaaagatattaaagagcaaggcgtttatatgggcgatatgcct
ttaatgaccacgaatggtacctttatcgttaatggtactgagcgtgttattgtttcacag
atgcatcgttctcccggtgtcttttttgatcatgataaaggaaaatcgcattcatcggga
aagtttctttttgctgcccgtgttattccttatcgtggttcttggcttgatattgaattt
gatgctaaggacatcatttatgctcgtattgatcggcgacgtaagattcctattacgagt
cttttgatggcattaggtatggatgcatcagatattttgtcaactttttataataaagtt
acctatgaacgggatggggatggatggcgcattccttattctgttggtcgctttaaagga
gtgaagctcatttctgatcttgtagatgcagacagtggtgaagttgttgccgaggctggt
aaaaagctaacagttcgtgctgcgaaagctttagcagaaaagggtctaaaggcggttaaa
atcactgaggatgatttattagggtcctatttagcggaagatatagttaactaccagaca
ggtgaaatttaccttgaagctggtgatgaaattgatgaaaaagcattaaaaattttgttt
gatgttagtgctgaccaaattaatattcttgatattgatcacatgaatattggagcatat
atccgcaatactttaaaggtggataaaaatgaaagtcagcaagatgcgttgtttgatatt
tatcgagtgatgcgtccaggtgagccaccaacaatggatacagcagcagctatgttccat
tcgttattttttgatccagaacgttatgatctttcggctgttggacgtgttaagatgaat
ttacgtatggatcttgattgtccagatacggttcgcattttgcgtcaggaagatattctt
gctgttgttaaaatgttggttgaattgcgtgatggtcgtggtgaaattgatgatattgat
aatcttggcaatcgtcgtgttcgttcagttggggaattgatggaaaatcaatatcgcatt
ggtttgcttcgtatggagcgtgcgataaaagagcgtatgtcatcggttgaaattgatact
gtcatgccccaggatttgattaacgcaaagccagctgctgcagcggttcgtgaatttttt
gggtcttcgcaattgtcgcagtttatggaccaaaccaatccattgtccgaaattacccat
aagcgccgtctttctgctcttggtccaggcggcttgacacgagaacgtgcaggctttgaa
gttcgtgacgtgcatcctacgcattatggtcgtatttgtccgattgaaacgccggaaggc
cctaatattggtctgattaattccttagcaacttttgcgcgggttaataaatatggtttt
attgaaagtccatatcgcaaaattattgatggtaaagtgacaacggaagttatttatctt
tctgctatggaagagtcaaagcattatgtggctcaggcgaattcttcattagacgctgag
ggacgttttacagacgaatttgttgtttgccgtcatgcgggggaagttttgatggcgccg
cgagatcatgtcgatttgatggatgtttcaccaaagcagttagtttcagtagctgctgct
ctcattccatttttggaaaatgatgatgcaaatcgtgcgttgatgggatcgaatatgcag
cgtcaagccgttccgcttgtacgcgctgaagcaccatttgttggtacgggtatggaatca
atagtagctcgcgattcaggggctgctgttagtgcaaagcgtggtggtattgttgatcaa
gttgatgcaacccgtattgttattcgtgcgacagaagatttagatccttcaaagtctggg
gttgatatttaccgtttacagaaatttcaacgttccaatcaatccacttgtattaatcag
cgtcctctcgtgcatgttggtgatcgggtagagaagggaaatatcattgcggatggtccg
tctacggatcttggtgatctagctcttggtcggaatgttcttgtggcatttatgccttgg
aatgggtacaattatgaagattccattttgctttccgagcgtatcgttgccgatgatgtc
tttacttcgattcatattgaggagtttgaggttgctgcacgtgatacaaagcttggtcct
gaagaaattacgcgtgatattccaaatgttgcggaagagtccttaaggaatcttgatgag
gctggaattatctatattggtgctgaagttcagcctggtgatattttggttggtaaaatt
acaccaaagggtgagagtcctatgacaccggaagagaaacttctgcgtgcaatttttggg
gaaaaggcttcagatgttcgtgatacttctatgcgaatgcctcctggggcttttgggact
gttgttgaagttcgtgtttttaaccgccatggtgtggaaaaggatgaacgtgcaatggcc
attgaacgtgaggaaattgaacgtttagctaaagatcgtgatgatgaacaatcaatcctt
gatcgtaatgtttatgcgcgtcttactgatatgttgacaggcaaaattgctgtagaaggt
ccaaaaggcttttcgaaaggcaagaagcttgataatacgataatgggtcattatccacga
tcgcagtggtggcaatttaccgttgaggatgaaaagcttcaaagtgaaattgaggctttg
cgcaagcagtatgatgaatcaaaagaagcgttgcaacgtcgctttatggataaagttgag
aaggtccagagaggtgatgaaatgcctcctggtgtcatgaagatggtgaaggtttttgtg
gctgtaaagcgcaaaatccaaccaggtgataagatggcgggacgtcatggtaataagggt
gttgtatcacgtattcttccaatagaagatatgccatttcttgaagatggaacccatgct
gatatcgtcttgaatccacttggtgtgcctagtcgtatgaatgttggtcaaattcttgag
acacatcttggatgggcatgtgcaggtatgggtaagaagattggcgatttggtggatttg
tatcaagaaacaggggatatatttcctttgcgtcagcgtatcgagaatcttatgcctgat
aatgatcataatgaaccagtacgtcagtacgataatgagagcctttacaaattggcgcta
cagatgaggaaaggcgtttcaattgcaacacctgtttttgatggagcacatgaagctgat
atcaacatgatgctcgaagatgcggacttggatagctcagggcaggttgtgctttatgat
ggtcgtactggagagccttttgatcgtccggtgacggtggggtatatttatatgttgaaa
ttgcatcaccttgttgatgataagattcatgcgcgttcgattggtccgtattcacttgtt
acacagcagccattaggtggtaaggcacaatttggtggtcagcgttttggtgaaatggag
gtttgggcacttgaagcttacggtgcagcatatactttgcaggagatgctgacagtgaaa
tcggatgatgtggctggtcgaacaaaagtttatgaggcgattgtgcgcggtgacgataca
tttgaggcaggtatacccgagagctttaatgtgttggtgaaagagatgcgttcacttgct
cttaatgtagaacttgatgatgcacgtgagcttatcgcacaacgagtattgtctgataca
acagaacaataa
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