Bradyrhizobium sp. Ash2021: NL528_00385
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Entry
NL528_00385 CDS
T11004
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
braa Bradyrhizobium sp. Ash2021
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
braa03400
]
NL528_00385 (addA)
Enzymes [BR:
braa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NL528_00385 (addA)
DNA repair and recombination proteins [BR:
braa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NL528_00385 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WMT74943
LinkDB
All DBs
Position
91453..94962
Genome browser
AA seq
1169 aa
AA seq
DB search
MVKAPRAIPDAVRATQARASDPAASAFVSANAGSGKTHVLVQRVIRLLLQGVPPEKILCI
TFTKAAAANMAERVFSTLGHWVTLGDEALDAAIREAGIPHVNAKLRKAARKLFACALETP
GGLKVQTIHALCTRLLQQFPFEANVPARFAVLDDRDQNEMMERANLSVLLEASRNPDSAT
GRALTMAMASAADVTFKEVVREACLSRDHFMAWTDAAGGAHAVAAQMSAALGVAAGDRIE
DVEREILDGPNLPRSRWEDIALVLDTGSKTDQGQAAQLRAALAFSGAAQVDEYLGVFLTD
TDRTPRKSVVTKNFARDNPAIGRLFESEISRLDPLIERRRAVTTRDRTEALLHIATAAAA
NYRREKQERGLLDYDDLIDKTLEMLDRVSSGWVHYKLDRGVDHVLIDEAQDTSPRQWDIV
THIISEFTSGAGARDGVVRTVFAVGDEKQSIFSFQGAAPREFDLRRRGLQKKFTDAGLKF
DPVSFTYSFRSGPTILQSVDHVFRDEAVYRSIHAVENGYPTHHSLADAGPGLIDLWELAE
TDGKQDIEGWRAPFDGVSVTSPEVKLAKRIQAEIKSLVEGGTMTGSTDGRRRLRYGDVLV
LVRRRGNAFDAVIQALKHASIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALAVAL
KSPLFGLTDDDLFQLAWQRKMPLRQALTAHAATDGKFRDALTRLQQCERHCLSEAPFAFY
AWLLGGDGGRARILKRLGHEANDALDEFLELALNYERKAPASLQGFMAWLRAADTEVKRD
MEISRDEVRVMTVHGAKGLEASVVFLVDTTTSPSDTQRLKLINLPQGNAGPHAPGVVVWA
GRKADDPLSVAAARSAMLADTEDEYRRLLYVAMTRAADRLVVGGCLPGNMNSVRKSSWYD
LITKGLANSGLQLAELQTPHGVVKRYARAEEAEISDGAVAASAAAAPIELPSWLRTPAPS
ETAAGGLLRPSDPGDGDGHQVRTGESITLRARALQRGTLVHRLLQSLPDIAIDRRREAAL
AYLARNADGWSADEQNALAEAALALIVDARFAPVFAPGSRAEVSIVGRLERPGQPKALVS
GQIDRLVVTPSEVLIVDYKTNHAPPTLAAEAPQGYVRQLALYRAVLQKLYPKKPVRAALL
WTETPELMEISTPALDAQLATLIQRDDRA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcaccccgcgccattcccgatgccgtccgcgcgacgcaggcgcgcgcgtcc
gatccggcggcttccgcgttcgtctcggccaatgccggttcgggcaagacccatgtgctg
gtgcagcgggtgatccggctgctgcttcaaggcgtgccgccggaaaagattctctgcatc
actttcaccaaggccgccgccgccaacatggcggagcgggtgttttccacgctcggccat
tgggtcacgcttggcgacgaggcccttgatgccgcgatccgcgaggcaggcatcccgcac
gtcaatgcaaagctgcggaaggcggcgcgcaagctatttgcctgcgcgctggagacgccg
ggcgggctgaaggtgcagaccatccacgcgctgtgcacccgcctgctgcagcaatttccg
ttcgaggccaatgtgccggcgcggttcgcggtgctcgatgaccgcgaccagaacgagatg
atggagcgcgccaatctgtccgtgctgctggaggcgtcccgcaatcccgacagcgccacg
ggccgcgcgctcaccatggcgatggccagcgccgccgacgtcaccttcaaggaagtggtg
cgcgaggcctgtctcagccgcgaccatttcatggcctggaccgatgccgccggcggtgcg
cacgccgtcgcagcgcaaatgtcggccgcgctcggcgttgccgccggcgaccgcatcgaa
gacgtcgagcgcgagattctggatggaccgaatctgccgcgatcgcgctgggaagacatc
gcgctcgttctcgataccggcagcaagaccgaccaaggtcaggcagcgcagctccgggcg
gcattggcgttttccggcgcagcgcaagtggatgaatatctcggcgttttcctgaccgac
accgaccgcacgccgcgcaaatcggtggtgacaaagaactttgcgcgggacaatcctgca
attggccgtctgtttgaatccgaaatcagtcgcctcgatcccctgatcgagcgccgccgc
gcggtgacgacccgcgaccgcaccgaggcgctgctgcatatcgcgaccgcggcggcggcg
aactaccggcgcgagaagcaggaacgcggcctgctcgattatgacgatttgatcgacaag
accctcgagatgctggaccgcgtttcttccggctgggtgcattacaagctcgatcgcggc
gtcgatcatgtgctgatcgacgaggcgcaggacaccagcccccggcagtgggacatcgtc
acgcatatcatctccgaattcacatcgggcgccggcgcgcgcgacggcgtggtgcgaacg
gtgttcgcggtcggcgacgagaagcagtcgatcttctcgtttcagggcgctgctccccgc
gaattcgacctccgccgccgcggcctgcagaagaagttcaccgacgccgggctgaaattc
gacccggtatcgttcacctattcgttccggtcgggaccgacgatcctgcaatcggtcgac
cacgtgtttcgcgacgaggcggtctaccgcagcattcatgcggtcgagaatggctacccg
acccaccattcgctcgccgacgccggtcccggcctgatcgacctctgggaattggcggaa
accgacggcaagcaggacatcgagggctggcgcgcgccgttcgacggcgtctccgtgacc
agtccggaagtgaaactggcaaagcgcatccaggccgagatcaagtcgctggtggaaggc
ggcaccatgaccggcagcaccgacggccgccgccggctgcgctatggcgacgtgctggtg
ctggtgcggcggcgcggcaatgcgttcgacgcggtgatccaggccttgaagcacgccagt
atcccggtcgcaggcgccgaccggctcaagctgaccgaacacatcgcgatcatcgacctg
atgaacctcgccgacgcgttgctgctgccgcaggacgatctggcgctggcggtggcgctc
aagagcccgctgttcggcctcaccgacgacgatctgttccaactggcctggcagcgcaaa
atgccattgcgccaggcattgaccgcgcatgccgcgacggacggcaagttcagggatgcg
ctaacgcgtctgcagcaatgcgagcgccattgcctgagcgaagccccgttcgcgttctac
gcctggctgctcggcggcgatggcggccgcgcgcgaatcctcaagcggctgggacatgaa
gccaacgacgcgctcgacgaatttctggagctggcgctgaattatgagcgcaaggcgcca
gcctcgctgcagggcttcatggcctggctgcgcgcggccgacaccgaggtgaagcgcgac
atggagatctcgcgcgacgaagtccgcgtcatgaccgtgcacggcgccaagggcctggaa
gcctccgtcgtgttcctggtcgacaccacgacgtcgccttcggacacccagcggctgaaa
ctgatcaacctgccgcaaggcaatgccgggccgcatgcgcccggtgtcgtggtctgggcc
ggccggaaggccgacgatcccttaagtgtcgccgccgcgcgcagcgccatgctggccgac
accgaggatgaataccgccgcctgctctatgtcgcgatgacgcgcgccgccgaccggctg
gtcgttggcggctgcctgcccggcaacatgaatagcgtgcgcaaatcctcctggtacgac
ctgatcaccaaaggcctcgccaattccggactgcagcttgcggaactgcaaacacctcat
ggcgtggtgaagcgctatgcgcgggccgaggaggcagagatctccgacggcgcagtcgcg
gcttcggcagcggccgcgccgatcgagctgccgtcctggctgcggacgccggcgccatcg
gagacggccgccgggggcctgttgcgcccttccgatcccggcgatggcgacggccatcag
gtccggaccggcgaatcgatcacgctgcgcgcccgtgccctgcagcgcggcacgctggtg
caccggctgctgcaatcgctgcccgatatcgccatcgaccgccgccgcgaggccgcgctg
gcctatctcgcccgcaacgccgacggctggagcgcggacgagcagaacgcgctggcggaa
gcggcgctggccctgatcgtggatgcccgctttgcgccggtattcgcgcccggcagccgc
gcggaagtgtcaatcgtcgggcggctggagcggccgggacagccaaaggcgctggtttcc
ggacagatcgaccggctggtggtgacgccttcagaggtcctgatcgtcgattacaagacc
aaccatgccccgcccaccctggcggccgaggcgccccaaggctatgtccggcagctcgcg
ctttaccgggcggtgctgcaaaaactttatcctaagaagccggtccgcgccgcgctgctt
tggacggaaacccctgaattgatggagatttctacccctgcgctggacgcgcaactggca
acccttatccaaagggatgaccgtgcttga
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