Bradyrhizobium sp. NDS-1: RX330_20040
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Entry
RX330_20040 CDS
T11383
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran02024
Quorum sensing
bran03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RX330_20040 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RX330_20040 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bran03019
]
RX330_20040 (hfq)
03036 Chromosome and associated proteins [BR:
bran03036
]
RX330_20040 (hfq)
Messenger RNA biogenesis [BR:
bran03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RX330_20040 (hfq)
Chromosome and associated proteins [BR:
bran03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RX330_20040 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOH70589
LinkDB
All DBs
Position
4248140..4248388
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AA seq
82 aa
AA seq
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MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDQPA
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaccgcgcacaaaacctacaggacaccttcctcaatcacgttcgcaaaacc
aagacgccactgacgatctttctggtcaacggagtgaagctccagggcattgtgacctgg
ttcgacaatttctgtttgctgcttcggcgcgacggtcactcgcagcttgtctacaagcac
gcgatctcgaccatcatgccgggcgcaccgattcagttgttcgaaggcggcgaggatcag
ccggcttga
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