Brenneria rubrifaciens: EH207_02460
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Entry
EH207_02460 CDS
T05976
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
brb
Brenneria rubrifaciens
Pathway
brb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH207_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brb03019
]
EH207_02460
03009 Ribosome biogenesis [BR:
brb03009
]
EH207_02460
Messenger RNA biogenesis [BR:
brb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH207_02460
Ribosome biogenesis [BR:
brb03009
]
Prokaryotic type
rRNA helicases
EH207_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QCR07509
UniProt:
A0A4P8QPW3
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All DBs
Position
507410..509230
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AA seq
606 aa
AA seq
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MTDLSTSFANLGLSAPIINALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
ALPLLNNLKPELKAPQMLVLAPTRELAVQVAEACNDFAKHMHGVNVVALYGGQRYDVQLR
ALRGGAQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAQ
HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTAQGVRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGQRRLAKFAAKVQQQLESSDLDMYRALLAKLQPQEELDIET
LAAALLKMAQGERPLILPPDPVFDRRPRREFRDRDDAGRGDRRREPRDSRDGERPARRER
RDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGD
LLSHFTRTRILNKPMNMQLLGDAQPHERREGGERRGGRPAGRDSGPRRSFNRDAAPRAPR
RRPVDA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttatcaacttcttttgctaatttggggctgtctgctccgattattaatgcc
ctgaccgatctgggctacgaaaaaccatcgccgattcaggctgaatgtattccccatctg
ctgagcggtcgcgatgtgctgggcatggcgcagaccggcagcggtaagactgcggctttt
gctctgccattacttaataatttaaaacctgagttaaaagcgccgcagatgctggtgctg
gccccgacacgcgaactggcggttcaggtggctgaagcctgtaatgattttgccaagcat
atgcatggtgtcaatgtggttgctctgtatggcggccagcgttacgacgtgcaactgcgc
gccttgcgcggcggagcacagatcgttgtcggtacgccggggcgtctgctggatcacctg
aagcgcggtacgctggatctgtctaacctgagtggtctggtactggatgaagccgatgaa
atgttgcgtatgggctttattgaagatgtagagaatatcatggcgcagatcccggctcag
catcagaccgcgctgttctctgcaaccatgccggaagcgattcgtcgtattacccgtcgt
ttcatgaaagatcctcaggaagttcgcattcagtcaagcgtgacgacgcgccccgatatc
agccagagctactggaccgcacaaggcgttcgtaaaaatgaagcgctggttcgttttctg
gaagcggaagattttgatgcggcgattattttcgtgcgtaccaaaaatgcaacgctggaa
gtggcagaggcgctagaacgcagcggttatagtagcgcggccttgaatggcgacatgaac
caggcactgcgtgaacagacgctggagcgtctgaaagacggccgtctggatattctgatc
gccaccgacgttgccgcccgtggtctggacgttgagcgtatcagcctggtggtaaactac
gatatcccgatggattctgaatcctacgttcaccgtatcggtcgtactggccgtgccggt
cgtgccggccgtgcattactgtttgtggaaaaccgtgagcgtcgcctgctgcgtaacatt
gaacgcaccatgaaattgacgattcccgaagtggaattgccaaatgcggaactgctgggg
caacgccgtctggccaagtttgccgctaaagtacagcaacagctggaaagcagcgatctg
gatatgtatcgtgcactactggcaaaactgcaacctcaggaagagcttgatattgaaacg
ttggccgcggcgttgttgaagatggcgcaaggtgagcgtcctttgattctgccgcctgac
ccggtatttgatcgtcgtccgcgtcgtgaattccgcgatcgtgatgatgcgggtcgtggt
gatcgtcgccgtgagccacgtgacagccgtgacggagagcgtccagcacgtcgtgagcgc
cgtgatgtgggtgacatggagctgtatcgtattgaagtgggccgtgatgatggtgtcgaa
gttcgccatattgtgggggcgattgccaatgaaggcgacatcagcagccgctatatcggc
aatattaaactgtttgcttctcactcgaccatcgaactgccaaaaggcatgccgggtgat
ttgttatcacactttactcgtactcgtattctgaacaagccgatgaatatgcagttactt
ggcgatgctcagccgcatgaacgtcgtgagggcggcgagcgtcgtggtggtcgtcctgcg
ggtcgtgacagtggcccgcgccgttctttcaaccgtgatgcggcgccgcgtgctccacgt
cgtcgtcctgtggacgcttaa
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