Bradyrhizobium sp. CCGE-LA001: BCCGELA001_29025
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Entry
BCCGELA001_29025 CDS
T04273
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Pathway
brc00040
Pentose and glucuronate interconversions
brc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BCCGELA001_29025
Enzymes [BR:
brc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
BCCGELA001_29025
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AMA59896
UniProt:
A0A0X8CM44
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Position
complement(6277066..6278361)
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AA seq
431 aa
AA seq
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MIRRFRHWILLSVIASVALCPAAKAQDRRIVAEPVAPRTVCDRPVPSGRQDTTNLQNAID
GCPVGEAVYLQRGEFLSGPLEMKSGVTLWIGRGATLIAIAEPTAYDKGRGHCGRIAGKGD
GCRPFISFSRTRGGGIYGEGTIDGQGGAPMAGSAESWWQLARRAQAEGGNQNAPRLIQID
HAQDVTLYGLTLRNSPNFHVAMNQVQGATFWRLTIDAPADARNTDGIDPGASQDITIAHS
VIRTGDDNVAIKAGNNGPTRHISITDNYLGWGHGLSIGSEVNSGVSDILVRGLTLDGTTS
GLRIKSDVSRGGLVERVTYEDVCLRGNRWPIMFDTKYDSLARGDSIPLYRQVVLRRVRGD
TGMLLMRGLDRSHALEITLDDVRFADSATWYIENANVTVGPSGVSPPLPRGPAEGPLPRG
SENCAKAFPSP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtcgctttcgccattggattctgttgtccgtaattgcctcggtggcgctctgt
ccggccgccaaagcgcaggaccgccgcattgtcgccgaacctgttgcccctcgtactgtg
tgtgaccgcccggtgccgtctggcaggcaggatacgacgaacctgcagaacgccattgac
ggttgtccggtcggagaggcagtttacttgcagcgcggcgagttcctgtcgggtccgctc
gaaatgaaatcaggcgtgactttgtggatcggacgcggtgccacgctaattgcgatcgct
gaaccaacggcttatgacaagggtcgggggcattgtggtcggatcgctggcaaaggcgac
ggttgccggccgttcattagcttttccagaacgcgcggcggtggcatctatggcgagggc
accatcgatggccagggcggcgcgcctatggccggcagcgccgaatcttggtggcagctg
gcacgccgcgcacaggctgagggcggcaaccaaaacgcgccgcgtttgattcagatcgac
catgcgcaggacgtgactctgtacggcctgacgttgcgcaattcgccaaacttccatgtg
gcgatgaatcaagtccaaggagccaccttttggcgcctcaccatcgacgcacctgccgat
gcccgtaacacagatgggattgatccgggcgcaagccaagacatcaccatcgcccacagc
gtgatccgcactggagacgacaatgttgcgatcaaggccggcaacaatggtccaacccgt
catatctccattaccgataattatttgggctggggacatggattatcgattggcagtgag
gtgaactccggtgtcagcgacatcctggtgcgcggccttaccctggacggcaccacttcg
ggcctgcgcatcaagagcgatgtcagccggggcggtctggtggagcgggtgacctatgag
gatgtttgtctgcgcgggaaccgatggccgatcatgttcgacacaaaatacgattcccta
gcccggggtgatagcattccactctaccgccaagtcgttctgcgtcgtgtccgtggtgat
acgggcatgctgctgatgcgcgggctcgaccgatcgcatgctctcgagattaccctggac
gatgtacggtttgccgattccgcgacctggtacattgagaatgccaatgtgactgtggga
ccttccggcgtgtcgccgccgctgccgcggggtccagctgagggtcctctgccccgcgga
tcggagaactgtgcaaaagcattcccgagcccgtag
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