Balearica regulorum gibbericeps (East African grey crowned-crane): 104629478
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Entry
104629478 CDS
T09009
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03440
Homologous recombination
breg03450
Non-homologous end-joining
breg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104629478 (RAD50)
03450 Non-homologous end-joining
104629478 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104629478 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
breg03032
]
104629478 (RAD50)
03400 DNA repair and recombination proteins [BR:
breg03400
]
104629478 (RAD50)
DNA replication proteins [BR:
breg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104629478 (RAD50)
DNA repair and recombination proteins [BR:
breg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104629478 (RAD50)
BRCA1-C complex
104629478 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104629478 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad50_zn_hook
AAA_21
AAA_23
SbcC_Walker_B
AAA_15
SMC_N
DUF2703
NPV_P10
AAA_29
Motif
Other DBs
NCBI-GeneID:
104629478
NCBI-ProteinID:
XP_010307010
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VRSIESQLDPLKSSLAAVEQNLIKVMKLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITTRDSLIQSLAAQLELDGFERAPFNERHITSFQRLLKERQEKDTEAANHLMREFAR
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNRKQVELKNVKYELQQLEGFSDRILELDQE
IVKTEHELEKAERNSNVEALELEVRTLQNEKINLDKALRKLDQEMEQLNLHTTTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHGKNKKINQTRDNLADLNKR
LASVEYHKTYVTNELKKKEAQLSLHEAKLFDVCGSQDFDSDLSKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRNKIQNANRDLTGLKGEIEEQESLLQTALS
EEGGAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHSWD
TVNGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLDTTLEKLQQEKEDLVNKRTASNKETQEKINVIREKVKDINKYVKE
IENYIQQGKDDYKKQKESELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKDVEDNIKHLVKEMGEMKVPQMKNEQKHLEETIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaaaatgagtatcctcggcgtgaggagttttggggtagaggataaa
gacaaacaaattatcactttctttaatccattaactattttggtgggaccaaatggtgca
ggaaaaacgaccatcattgaatgtcttaaatatatttccactggagattttcctcctggc
accaaaggaaactcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgagatgtaaatggagagcttgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaaggtgtcattactaga
acaaagcatggcgagaaggtcagtctgagttccaagtgtgcagaaatcgatcgagagatg
atcagcgcccttggtgtttccaaatcagtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccttgaaacagaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaagcaaagc
ttgaaagtaaaagagtgtcagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccaggatcatcttagcaatagagaggctcaactggctgcttcgaaggagaat
gtcagatctattgagagtcaacttgatcctctaaagagttctctggcagcggttgaacag
aatcttataaaagtaatgaagctagacaacgatgtaaaagccctggagagcaggaggcgg
caaatggagaaagataatcaagatttgcagcagaagatggaaaaggtttttcagggaaca
gatgaacaactaagggacagataccagaaccaccagagaacagtgaaggagaaggagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgaaaaatcagaactacttattgaacgaggtcgtttgcaactgcaagcagatcgtcac
caggaacacattacaacaagggattcgttaattcagtctttggcagcacagctggaattg
gatggttttgagcgagcaccttttaatgaaagacacattaccagttttcagaggttgttg
aaggagagacaggaaaaagatacagaagctgcaaaccatttaatgagagaatttgcacga
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataggaaacaagttgagctgaagaatgta
aaatacgaattgcagcagttggaggggttttcagacagaattctggagttggatcaggag
attgtcaagacagaacacgagctggagaaggcggagaggaacagcaatgtagaagcactc
gaactggaagtacgaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaggagatggaacagttgaatctacataccacaacgattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagattagaaaagtaaaatcaaggcattct
gatgaactgacatcactgttgggatactttccgaataaaaaccaacttgaagactggctt
catggtaaaaataaaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcagtagagtatcataaaacttacgtcactaatgagctaaagaaaaaagaagca
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgagcaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgcc
ggagccactgccgtttattcacagttcattacacaactgacagaggagaaccagtcgtgt
tgtccagtttgtcaaagagtttttcaaacagaggctgaattgcaagatgtaattagtgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagaaaaaaaacgtgatgaaatgatgagtcttaaaccacttagacgaactgtagtt
gaactccaagatagagacataccagacttgaggaacaagatacagaacgcaaacagggat
ttaacaggcctgaagggtgagatagaagaacaggaatcactcttgcagacagctttgtct
gaggaggggggtgccaaagcacgtttacaggatataacgctaatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtaggactgttctacaagtaagccaagagaaacaagagaaaaaacactcatgggat
acagttaatggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtacagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcgtcgtcgacaactggaggaacaaactgtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggtatttcctttggatacaactttagaa
aaactgcaacaggagaaggaggatctagtgaataaaaggactgcaagtaataaagaaaca
caagagaagataaatgtcataagagagaaagttaaggatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagacgactataaaaagcaaaaagagtctgaactt
gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagataagtaaagag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagacgttgaagacaatataaaacac
cttgtgaaggaaatgggagaaatgaaagtcccgcaaatgaaaaatgaacaaaaacattta
gaggagacaatagaatctctgaaaagaaaccatcatgtcgcacttggccgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacagttcaaagatgca
gaggagaaatacagggagatgatgattgttatgagaacaacagagctggtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gagtatatagaaattcgttctgatgcagatgagaacgtctcagcctctgataaaagaaga
agttacaattatagagtagtcatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcattagatgagcctactaccaatcttgatcgcgaa
aacatagagtctcttgcacatgccctggtggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggccgttct
gaatatgtggaaacgttctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagcgtcagctccctgggctcatacgttcattag
DBGET
integrated database retrieval system
