Balearica regulorum gibbericeps (East African grey crowned-crane): 104635543
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Entry
104635543 CDS
T09009
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04510
Focal adhesion
breg04512
ECM-receptor interaction
breg04518
Integrin signaling
breg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104635543
04518 Integrin signaling
104635543
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104635543
09142 Cell motility
04820 Cytoskeleton in muscle cells
104635543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
breg04147
]
104635543
00536 Glycosaminoglycan binding proteins [BR:
breg00536
]
104635543
Exosome [BR:
breg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104635543
Glycosaminoglycan binding proteins [BR:
breg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104635543
Hyaluronan
Extracellular matrix or blood plasma proteins
104635543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
DUF1194
vWA-TerF-like
DUF5507
Piwi
Usp
Motif
Other DBs
NCBI-GeneID:
104635543
NCBI-ProteinID:
XP_010300691
UniProt:
A0A087VE11
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
GEPGPPGDQGREGPLGPPGDQGEVGPPGPKGYRGDDGPRGNEGPKGLPGAPGLPGDPGLM
GERGEDGPPGNGTTGFTGAPGQPGDRGDPGINGTKGYVGPKGDEGEAGDPGNDNPTPGPR
GIKGAKGHRGPEGRPGPPGPVGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSES
IGLQNFQIAKDFIIKVIDRLSKDERVKFEAGESRVGVVQYSHDNTQELVAMGDANIDNIG
ALKQAVKNLKWIAGGTYTGEALQFTKENLLRRFTSDKRVAIVITDGRSDTLRDPTPLNSL
CDVTPVVSLGIGDIFRNPPNPDHLNDIACLSRPTRPGLSIQRDNYAELLDDTFLQNITSY
VCQEKKCPDYTCPITFAGLADITLLVDSSTSVGSKNFETTKKFVKRLAERFLEAGKPADD
SVRVSVVQYSGRNQQKVEAQFQYNYTVIAKAIDNMEFINDATDVNAALQYVTGLYQRSSR
AGAKKRVLVFSDGNSQGITPRAIERAVQEAQQAGIEIYVLAVGSQANEPNIRVLVTGKSA
DYDVVYGERHLFRVPDYTSLLRGVFYQTVSRKIAVD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
ggagagcctggaccacctggtgaccaagggcgggaaggacccctcggaccacctggcgac
cagggcgaggttggacccccaggacccaagggctacaggggagacgacggtccccgcggc
aatgagggcccaaagggattgcctggagcacctgggctgcctggagaccctggcctgatg
ggagagaggggggaggatggccctcctgggaacggcacgactgggttcacaggcgcccca
gggcagccaggagacagaggtgaccctggcattaacggaacgaaaggctatgtcggtcct
aaaggtgacgaaggagaagctggcgaccctggcaatgataacccaacccctggccccagg
ggcatcaaaggagcgaagggccataggggacctgaaggccgcccgggaccaccaggacct
gtggggcctccaggaccagatgaatgtgagatcttggacatcatcatgaagatgtgctct
tgctgcgagtgcacctgcggtcccgtcgacctcctcttcgtgttggacagctcggagagc
attggcctgcagaacttccagattgccaaggacttcatcatcaaagtcattgaccgcctg
agcaaggatgagcgtgtgaagtttgaagccggggagtcccgtgtgggcgttgtgcagtac
agccatgacaacacgcaggagctggtggccatgggggatgccaacatagacaatatcgga
gcactcaaacaggcagtcaagaacctgaaatggatagctgggggcacctacactggagaa
gccctgcagttcaccaaggaaaacctgctgcggagattcacctctgacaagcgcgtcgcc
atcgtcatcacggatggacgctccgacacgctgcgggaccctacgccgctcaactctctg
tgtgatgtcactccggtggtttcccttgggataggtgacattttccggaaccctccaaat
cccgatcacctgaatgacatcgcttgtttaagcagaccgaccaggccaggactgtccatt
caaagggacaactacgccgagctcctggatgacaccttcttgcagaacatcacctcatac
gtctgccaagagaagaaatgtccggattacacctgcccaatcaccttcgccgggctggca
gacatcacgctgctggtggacagctccaccagcgtgggaagcaagaacttcgagaccacc
aagaagttcgtgaagcggctggcggagcggttcctggaggccggcaagcctgccgacgac
tccgtgcgcgtctcggtggtccagtacagcggcaggaaccagcagaaagtggaagctcag
ttccagtacaactacacagtcattgcgaaagccattgacaacatggagttcattaatgat
gccacggatgtcaatgccgctctgcagtacgtcacggggctgtatcagcggtcgtcccgt
gctggggcgaaaaagagggttctggtgttttctgatggcaactctcaagggatcaccccg
agggccattgagagggctgtgcaggaagctcagcaggctggcatcgagatctacgtgctg
gcagtgggcagccaagccaacgagcccaacatccgtgtcctggtcacggggaagagtgca
gattacgatgtggtctatggggagcgccacctcttccgtgtgcccgactatacctctctg
ctgcgtggcgtcttctaccaaactgtctccaggaagatagctgttgactga
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