Balearica regulorum gibbericeps (East African grey crowned-crane): 104635844
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Entry
104635844 CDS
T09009
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104635844 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
breg03019
]
104635844 (CNOT1)
Messenger RNA biogenesis [BR:
breg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104635844 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104635844 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104635844
NCBI-ProteinID:
XP_010301126
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttctgtacaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagagttttggggatgatggcccgaact
cattcggggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatggaaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgag
ttggaccatccaggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagttttcccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaaccccgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtacgagcaggttaagcagctcttcagttttcctatcaagcactgc
ccagatatgttggtattggccttactgcagatcaacacttcctggcataccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcgtggcacggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcacaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagccctttatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggtggccttgctccagaaaaagatcaacccaaaagt
gctcaacttcctccagaaaccttggcgactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagcgaactgcagtaatgtc
atgaacaaggctaggcagccaccacctggagtcatgccaaaaggacgcccacccagcgct
agcagcttggatgccatctcccctgtacagatcgactcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcatttccccctctttccacccaa
aaccagacaacaggtttcagtggcatcggaggactctcttcgcagcttccagtaggtggt
cttactacgggtagcctgactggcataggaaccggagccctgggccttcctgctgtgaac
aatgatccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggcccgaggctaaccagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgcatttacaaccatccaccg
catccgaccatgtctgtggatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaagcgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttacatggcactgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcatcatttacaggagtacattgaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatcgta
accacctcaacgaccacgactgttgcaaaaaccattacaatcacccgaccgactggagtc
agcttcaagaaagacgtaccgccttccattaatactaccaacattgatacgctgttagta
gccacagatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtaatgaagagagtcagt
attgagcctaattttcacagcttatattcaaacttccttgacacgcttaagaatccagag
tttaataaaatggttctaaatgaaacctacagaaatatcaaggtgctgctgacgtcagat
aaagctgcagccaacttctcggaccgttccttgttaaagaaccttggtcactggctggga
atgattacactggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgcta
ctactggaagcatacgttaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatg
gccattatgaatgttttagctgagctacatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaacgagctgaaacctgga
agtctcctgaaagataaagatcgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacgact
ccagctaccagcaccacttgtacagccacggttcctccgcagccccagtacagttatcac
gacatcaacgtctattctttaggagggttggctccacatattaccttaaatccaacgatt
ccgctctttcaagcccacccgcagttgaagcagtgtgtgcggcaggcgatagagcgagcg
gtgcaagagcttgttcatccggtggtcgatcgatccattaagattgccatgactacttgt
gagcagatagtcaggaaggactttgcgctggattcagaggagtcacgaatgcgtgtggct
gcacaccatatgatgcggaacctgactgctgggatggccatgattacctgcagggaacct
ttgctgatgagcatagctaccaacttgaaaaatagttttgctactgcactgagggcagcc
tccccacaacagagggacatgatggagcaggcagctgcccagttagcacaggataactgt
gagctagcatgctgctttatccagaagacggctgtggagaaggcgggccccgagatggac
aagaggcttgcaactgaatttgagctcagaaaacatgctagacaagaaggtcgtcggtac
tgtgatcctgttgtgttaacttaccaggctgagcggatgccagagcagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
caagcttgggctacagacgatgtagcacagatctatgacaaatgtatgacagaactggag
cagcacctgcagtctattccacacaccctggccatgaatcctcaggctcaagcattgcgc
agcctcttggaggctgtggtagtggctcgtaactcccgtgatgctattgctgcacttggg
ctactgcagaaggctgtagagggcttactggatgccaccagtggggcagatgctgacctc
ctgcttcgctaccgtgagtgtcatctgcttgtgctgaaggctctgcaggatggccgtgcg
tatggatctccgtggtgtaataaacaaattactaggtgcctgattgaatgcagagatgag
tacaagtacaatgtggaagccgtggagctgctaatccgtaatcaccttgttaacatgcag
cagtatgaccttcacttggctcagtcaatggagaacggcttgaactacatggctgtggca
tttgccatgcagttggtaaagatcctgttggtggatgagagaagtgtcgcccatgtaaca
gaggcggatctgtttcacacgattgagacgctcatgaggattaatgctcattccagagga
aacgccccagaaggattgccccagctgatggaagtggtccgatcaaactatgaagcaatg
attgaccgtgctcacggaggtcccaatttcatgatgcattcaggaatttcccaagcctct
gagtatgatgatccaccaggtctgagggagaaggcagaatacctgctgagggagtgggtg
aacctctaccattcagctgcagcgggccgcgacagtaccaaagcgttctctgcgtttgtt
ggacagatgcatcagcaaggaatcctgaaaacagatgatctgatcactcgctttttccgt
ctttgcaccgaaatgtgtgttgaaatcagctatcgtgctcaggctgagcaacagcataat
cctgctgccaaccccactatgattcgagccaagtgctaccacaatctggatgcctttgtg
cgacttattgcactgctagtgaagcactcgggggaggcaaccaatacagttacaaagatc
aacctcctgaataaggttctcggtattgtggtgggagttcttctgcaagaccatgatgtt
cggcagagtgagtttcagcaacttccttaccatcgcattttcatcatgttgctgttggaa
ttaaatgctcctgagcatgtgctggagaccatcaacttccagacactcacagctttctgt
aacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtatgcccagttactgatcgatcttttcaagtacttggctcctttccttaga
aatgtggaactcaccaaacctatgcaaattctttacaagggcactctgcgcgtgttgctg
gtcttgttgcatgatttcccagaatttctctgtgactaccactacggattctgtgatgtg
atcccacctaactgtattcagctaaggaacctgatcctgagtgccttcccacggaacatg
aggcttccagaccctttcacccccaatctaaaggtggacatgttaagtgagattaatatt
gctccacgaatactcacgaatttcactggagtaatgccacctcagttcaagaaggacttg
gattcctatctcaaaacccgttctccggtcacgtttttgtccgacttgcgcagcaaccta
caagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgcactggtgctc
tacgtaggtactcaagctattgcgcacattcacaacaaaggcagcacaccctctatgagc
accattacccactcggctcacatggacatcttccagaatttggcagtagatctggacacc
gaaggccggtaccttttcttgaacgcaattgccaaccagctgcgataccccaacagtcac
acccactacttcagttgcaccatgctgtacctgtttgcagaggccaacactgaggctatc
caggagcagatcaccagggttctcttggaacgactgattgtaaataggcctcatccctgg
ggtctccttattactttcatcgagctgatcaaaaatccagcatttaagttctggaaccat
gagtttgttcactgcgctccagaaattgagaagttgttccagtcagttgcacagtgctgc
atggggcagaagcaggcccagcaagtcatggaagggactggtgccagttag
DBGET
integrated database retrieval system
