Mycetohabitans rhizoxinica: RBRH_01704
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Entry
RBRH_01704 CDS
T01355
Name
(GenBank) DNA-directed RNA polymerase beta chain (EC 2.7.7.6)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
brh
Mycetohabitans rhizoxinica
Pathway
brh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBRH_01704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brh03021
]
RBRH_01704
03400 DNA repair and recombination proteins [BR:
brh03400
]
RBRH_01704
Enzymes [BR:
brh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBRH_01704
Transcription machinery [BR:
brh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBRH_01704
DNA repair and recombination proteins [BR:
brh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBRH_01704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RnfC_N
BSH_YknX
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CBW74542
UniProt:
E5APL0
LinkDB
All DBs
Position
942961..945099
Genome browser
AA seq
712 aa
AA seq
DB search
MDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKAVVGTGIERTTAVDS
GTTVQAFRGGVVDYVDAGRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVK
VGDRVARGDVIADGASTDLGELALGQNMLVAFTPWNGYNFEDSILISERVVADDRYTSIH
IEELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGE
TQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMTGTVIDVQVFTREGIQRDKRAQQIIDDE
LKRYRLDLNDQLRIVEGDAFERLARMLDGKVVNGGPKKLAKGAKITREYLDDLDHYHWFD
IRLADEDAAAQLEAIKESIEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRR
LQPGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPCDVVLNPLGVPSRMNVGQILETHLGW
AAKGLGWRIGEMLQAKKATLVQDLRSFLTKVYNESGHPESIDEMSDDEVIELAQNLREGV
PFATPVFDGAHEKEISRMLDLAFPDEVAQQLGMTKSKNQVALYDGRTGEAFERPVTVGYM
HMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEM
LTVKSDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgcgccgtcgcagatcgtgtcggtggccgcgtcgctgattccgttcctcgag
cacgatgatgcaaaccgtgcattgatgggctcgaacatgcagcggcaggcggtgccttgc
ctgcgaccggaaaaagcggtggtcggcaccggtatcgagcgtacgaccgcggtggactcc
ggcacgacggtgcaggcgttccgcggtggcgtggtcgactatgtcgacgcgggccgcgta
gtgattcgcgtcaacgatgacgaagcagtggccggtgaggtcggcgtcgacatctacaac
ctgatcaaatacacgcgctcgaaccagaacacgaacatcaaccagcgcccgatcgtgaag
gtcggcgaccgtgtcgcgcgtggcgacgtgatcgccgatggcgcgtcgacggacctgggc
gagcttgcgctcggtcagaacatgctggtcgcgttcacgccgtggaacggctacaacttc
gaagactcgatcctgatctccgagcgcgtcgtcgccgacgatcgctatacgtcgatccac
atcgaagagcttaatgtcgtggcgcgcgacacgaagctcgggccggaagaaatcacgcgc
gacatctcgaacctggctgaagtgcaactgggtcgcctggacgaatcgggcatcgtctat
attggcgccgaagtcgaggcgggcgacgtgctggtcggcaaggtgacgccgaagggcgag
acgcaactgacgccggaagaaaagctgctgcgcgcgatcttcggcgagaaggcgtccgat
gtgaaggatacgtcgctgcgcgtgccctcgggcatgaccggcaccgtgatcgacgtgcaa
gtgttcacgcgcgaagggatccagcgcgataagcgtgcccagcagattatcgatgatgaa
ctcaagcgctatcggctggatttgaacgaccagttgcgcatcgtcgaaggcgacgcattc
gagcggctggcgcggatgctcgacggcaaggtcgtgaacggcggtccgaagaagctggcg
aagggcgcgaagatcacgcgcgaatacctggatgacctggaccattatcactggttcgac
atccggctggccgatgaggacgcagcggcgcaattggaagcgatcaaggaatcgatcgag
caaaagcgccatcagttcgacctcgcgttcgaggaaaagcgcaagaagctcacccaaggc
gatgaactgcccccgggtgtgctgaagatggtcaaggtgtacctggcggtcaagcgtcgt
ttgcagccgggcgacaagatggcgggtcgccacgggaacaagggcgtggtgtcaaagatt
gttccgatcgaggacatgccgtacatggcggacggccgcccgtgcgatgtcgtgctcaat
ccgcttggtgtgccgtcgcggatgaacgttggccagatccttgagacccacttgggctgg
gccgcaaagggcttgggctggcgtatcggcgaaatgctgcaggccaagaaggcgacgctc
gtgcaggatctgcgatcgttcctgacgaaggtctataacgagtcgggtcatccggagtcg
attgacgagatgtccgatgatgaagtcatcgaacttgcgcagaacctgagggaaggcgtg
ccgttcgcgacgccggtgtttgacggcgcgcacgagaaagagatttcgcgcatgctcgat
ctcgcgttccccgatgaggtggcgcagcagcttgggatgacgaagtcgaagaaccaggtg
gccctgtatgacgggcgcacgggcgaggcgtttgagcgcccggtgacagttggctacatg
cacatgctaaaactgcaccacttggtcgacgacaagatgcacgcgcgctcgaccggcccg
tactcgctagtgacacagcagccgttgggcggcaaggcacagttcggcggccagcgcttc
ggggaaatggaagtgtgggcgctcgaggcgtatggcgcatcgtacgtgttgcaagaaatg
ctgacggtgaagtcggacgacgtgacgggtcgcacgaaggtgtacgagaacctcgtgaag
ggcgatcacgtgatcgacgcggggatgccggagtcgttcaacgtgctggtgaaggaaatc
cggtcgctcggtattgatatcgacctggaccggaactaa
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