Buceros rhinoceros silvestris (rhinoceros hornbill): 104497715
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Entry
104497715 CDS
T08612
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104497715 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brhi03019
]
104497715 (CNOT1)
Messenger RNA biogenesis [BR:
brhi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104497715 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104497715 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104497715
NCBI-ProteinID:
XP_010139299
LinkDB
All DBs
Position
Unknown
AA seq
2371 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSEGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LNTGSLTGIGTGALGLPAVNNDPFVARKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKDDVAQIYDKCMTELEQHLQS
IPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYR
ECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLH
LAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPEG
LPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHS
AAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANP
TMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEF
QQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHR
IFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHD
FPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRIL
TNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVLYVGTQ
AIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFS
CTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHC
APEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagacccaatttctgatccaggagtgtgcgtcg
ctgattacgaaaccaaactttatctcgacgctgtcttacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgcgttactgaactcgttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactcccggaccttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gagcagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttcgctggcagatttcatgcaa
gaagttggctatggcttttgtacaagtgtcgaggagtgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggtgttggggatgatggctcgaact
cattcgggattgacagatggaattccattacaatctatttcagcccctggcagtgggatt
tggagtgaagggaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccatccggggtttcagattcgtgacagcaagggcctgcatatcgtagtgtttggc
atccagagagggctgggcatggaagtctttcctgttaatgccatatacagaccttggaag
cacgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcacctccagaggat
gacaatcgagaaattgccacctggaagagcctggatttgatcgaatctctgttgcggttg
gcagaagtggggcagtatgagcaggttaagcagctcttcagttttcccatcaagcattgc
ccagatatgttggtattggccttactgcagatcaacacgtcctggcataccttgcgccac
gaactcatctccacgctcatgccgattttccttggcaaccatcccaactctgccatcatt
ttgcactacgcttggcatggacagggtcagtctccttcgattcgtcagctcatcatgcat
gccatggcagaatggtacatgagaggggagcagtatgaccaggcaaaactgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcattcaggcctgtatgactttctta
aagaggagatgtccatctatcctgggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcaactatgttggcctgtctgcaagcgtgcgctggg
agtgtctctcaggagctgtcggagacgatcctcaccatggtcgcaaactgcagtaacgtc
atgaacaaggctagacagccgcctcccggggtcatgccaaaaggacgcccgcccagcgcc
agcagcttggatgccatctctcccgtacagatcgactcgcttgcaggaatggcatcgctc
agcttaggtggctctgctgctcctcatacccagagcatgcaaggcttccctccgaacctg
ggctctgccttcagtactcctcagtcaccagcaaaagcgttcccccctctctccacccaa
aaccaaacgacaggtttcagtggcatcggaggactctcttcgcagctcccagtaggtggc
cttaatacgggtagcctgactggcataggaactggagccctgggccttcctgcggtgaac
aacgacccgttcgttgcaaggaagctgagcacatctggactgaaccagccgacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaaccagcacttt
agcaaagaaatagatgacgaagcaaacagctacttccagcgtatttacaaccatcccccg
catccgaccatgtctgtagacgaggtcttggaaatgctgcagaggtttaaggactccaac
atcaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtaccccgataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtatcgctgcactagataga
tttaaaaataggttgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcaccatttgcaggagtacatcgagtatggacagcaatcgagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgtccaactggagtc
agcttcaagaaagacgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaactgaaggaa
acggtgaaagaagagttcatgccttgggtatcgcagtatcttgtgatgaagagagtcagt
attgagcccaactttcacagcttgtattcaaacttccttgacacactcaagaacccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcggaccgttccttgttaaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatactgcacacggatttggatgtcaaatcgctg
ctactggaagcatacgttaagggacagcaggaactgctttatgtagtgccgttcgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccgaacccatggacaatg
gccattatgaatgttttagctgagctacatcaagaacatgatctaaaattgaacctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggacgagcagctctctgctccaaag
aaggatgtgaagcagccagaggagctgccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagctaccac
gacatcaacgtctattctttaggagggttggctccacatattaccctaaatccgacgatc
ccgctgtttcaagcgcacccgcagctgaagcagtgtgtgcggcaggcgatagagcgagcg
gtgcaggagctggtccatccggtggtggataggtccatcaagattgccatgacgacgtgc
gagcagatagtcaggaaggacttcgcgctggattcggaggagtcgcgaatgcgtgtggcc
gcgcaccacatgatgcggaacctgactgctgggatggccatgattacctgcagggagcct
ttgctgatgagcatagctaccaacttgaaaaatagttttgctactgcactgagggcagcc
tccccacaacagagggacatgatggagcaggcggctgcccagttggcgcaggataactgc
gagctggcctgctgctttatccagaagacggctgtggaaaaggcaggccccgagatggac
aagaggcttgcaactgaatttgagctccggaaacacgcgaggcaagagggtcgtcgatac
tgtgatcctgttgtgttaacctaccaggcggagcggatgccggagcagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
gatgatgtagcacaaatctatgacaaatgcatgacagaactggagcagcacctgcagtcc
attccacacacgctggccatgaatcctcaagctcaagcgctgcgcagcctcttggaggct
gtggtagtggctcggaactcccgtgatgctattgctgcgcttggactgctgcagaaggct
gtcgagggcttactggatgccaccagcggggcagatgctgacctcctgcttcgctatcgt
gagtgtcatctgcttgtgctgaaggctctgcaggacggccgcgcgtatggatctccgtgg
tgtaataaacaaattactaggtgcctgattgagtgcagagatgagtacaagtacaacgtg
gaagcggtggagctgctgatccgcaatcaccttgtgaacatgcagcagtatgaccttcac
ctggctcagtccatggagaacggcctcaactacatggccgtggcgtttgccatgcagttg
gtcaagatcctgctggtggacgagagaagtgtcgcccacgtcacagaggcagatctgttt
cacaccatcgagactctcatgaggattaatgctcattcccgaggaaatgcccctgaaggg
ttaccccagctgatggaagtggtccggtcaaactacgaagcgatgattgaccgtgctcac
ggaggtcccaatttcatgatgcattcaggaatttcccaagcctccgagtacgacgatccg
ccaggcttgagggagaaggcagaatacttgctgcgggagtgggtgaacctctaccattcg
gctgcagcgggccgcgacagtaccaaagcgttctctgcgtttgttggacagatgcaccag
caaggaattctgaaaacggatgacctgataacccgctttttccgtctttgcaccgaaatg
tgtgttgaaatcagctatcgtgctcaggctgagcagcagcacaaccctgctgccaacccc
accatgattcgagccaagtgctaccacaacctggatgcctttgtgcgactcattgcactg
ctagtgaagcactctggggaggccaccaacacagttacaaagatcaacctcctgaacaag
gttcttggcattgtggtgggagtacttctgcaagaccatgatgttcggcagagcgagttt
cagcagcttccttaccatcgcattttcatcatgttgctgttggaattgaacgctcctgag
cacgtgctggaaaccatcaacttccagacgctcacggctttctgtaacacatttcacatc
ctgaggcctacaaaagctccaggttttgtttatgcctggctggaactgatctcccaccgg
atatttattgcaagaatgctggcacatacaccacagcagaagggttggcccatgtatgcc
cagctattgatcgatcttttcaagtacttggctcctttccttagaaacgtggaacttacc
aaacctatgcaaattctttacaagggcactctgcgtgtgttgctggtcctgctgcacgat
ttccccgaattcctttgtgactaccactacgggttctgtgacgtgatcccacccaactgt
attcagctaaggaacctgatcctgagtgccttcccgcggaacatgaggcttccagacccc
ttcacccccaatctaaaggtggacatgttaagcgagattaatattgctccacgaatactc
acgaatttcactggtgtgatgcctcctcagttcaagaaagacttggattcctatctcaaa
acccgctccccggtcacttttctgtctgacttgcgcagcaacctacaagtctcaaatgaa
cctggcaaccgctacaacatccagctgattaacgccctggtgctctacgtaggtactcaa
gcgatcgcgcacattcacaacaaaggcagcacgccctccatgagtaccatcacccactcg
gctcacatggacatcttccagaatttggcagtagacctggacaccgaaggccggtacctg
ttcctgaacgccatcgccaaccagctgcgctatcccaacagtcacacccactacttcagc
tgcaccatgctgtacctcttcgcagaggccaacaccgaggccatccaggagcagatcacc
agggttctcttggaacgactgattgtaaataggcctcacccctggggtctccttattact
ttcattgagctgataaaaaatccagcttttaagttctggaaccatgagtttgttcactgc
gctccagaaattgagaagttgttccagtcggttgcacagtgctgcatggggcagaagcag
gcccagcaagtaatggaagggactggtgccagctag
DBGET
integrated database retrieval system
