Brevibacterium sp. CS2: FDF13_05875
Help
Entry
FDF13_05875 CDS
T05958
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bri
Brevibacterium sp. CS2
Pathway
bri00190
Oxidative phosphorylation
bri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FDF13_05875
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDF13_05875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bri03019
]
FDF13_05875
Enzymes [BR:
bri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FDF13_05875
Messenger RNA biogenesis [BR:
bri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FDF13_05875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QCP04883
LinkDB
All DBs
Position
complement(1328593..1330737)
Genome browser
AA seq
714 aa
AA seq
DB search
MYDVSTFGLEHELPAPPDRFLDRELSWLAFNERVLELAADTSIPLLERANFLSIFASNLD
EFFMVRVAGLKRRIATGLAVPSITGAQPRAVMRSLGKHAHVLMERHSELLKTDIGPKLDA
EGIFSVSIADLTADERAKVDEFFESRVFPVLTPLAVDPAHPFPYISGLSLNLGVLLRHPQ
SGAELFARVKVPQVLPRFINVSETADSRQVSPEFPARFIALEEIIAAHLDRLFEGMEIVD
HSLFRVTRNEDVEVEEDDAENLLKALEKELLRRRFGPAVRLEVTDDLHPRVREILTRELG
IDESEIYELPTPLDLRGLSEITDISRDDLHFPKAVPAMNRDLSRAETSEQVDIFEAVSER
DILLHHPYDSFSTSVQAFLEQAAADPKVLAIKQTLYRTSGDSPIIDALVDAAQAGKQVLA
VVEIKARFDEEANITWARKLERAGVHVVYGIVGLKTHAKLCLVIRQESTGLVRYCHVGTG
NYHPKTARGYEDFGLLTRDPEVGQDLTKLFNQLSGYAPHADYSRLLVAPNRVRAGLIELI
ESETEHARAGREGRIRIKVNSIVDEPIIDALYLASRAGVRIELFVRGICAIRPGIPGLSE
NITVRSILGRYLEHSRIFVFGTGDRMVAYIGSADLMHRNLDRRIEALVRLSAAEHIAEVD
GLFDLAFAPTTSSFHLGAGGIWSRHSRGPDGEPLTDYQSELIRRHHRRRAVDRA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgtatcgaccttcgggctcgagcacgagctgcccgctccgcccgaccggttc
ctcgatcgcgagctcagctggctggcgttcaacgagcgggtcctcgagctcgccgccgac
acctcgatcccgctcctcgagcgggcgaacttcctcagcatcttcgcgtccaacctcgac
gagttcttcatggtccgcgtcgccggcctcaagcgccggatcgccaccgggctcgctgtg
ccgtcgatcaccggcgcccagccgcgggccgtcatgcgctcgctcggcaagcacgcgcac
gtcctcatggagcgccactccgagctgctcaagaccgacatcggccccaagctcgacgcc
gaggggatcttctccgtgtcgatcgccgacctcaccgccgacgagcgggcgaaggtcgac
gagttcttcgagtcccgcgtgttccccgtcctcaccccgctcgccgtcgaccccgcgcac
cccttcccctatatctccggactctcgctcaacctcggcgtgctgctgcggcacccgcag
tccggggcggagctgttcgcccgggtcaaggtcccgcaggtgctgccccggttcatcaac
gtctcggagaccgcggactcccggcaggtgagcccggagttcccggcgcggttcatcgcg
ctcgaggagatcatcgccgctcacctcgaccggctgttcgagggcatggagatcgtcgac
cactcgctgttccgggtcacccgcaacgaggacgtcgaggtcgaggaggacgacgcggag
aacctcctcaaggccctcgagaaggagctgctgcgccgccgcttcggaccggccgtgcgc
ctcgaggtgaccgacgacctccacccgcgggtgcgcgagatcctcacccgcgagctcggc
atcgacgaatccgagatctacgagctgcccaccccgctcgatctccgcggactgtccgag
atcaccgacatcagccgcgacgatctccacttccccaaggcggtcccggcgatgaaccgg
gacctgtcgcgggcggagacctccgagcaggtcgacatcttcgaggcggtgagcgagcgc
gacatcctcctccaccacccctacgactcgttctccacgagcgtccaggcgttcctcgag
caggcggccgcggaccccaaggtgctcgcgatcaagcagaccctctaccgcacctcgggc
gactccccgatcatcgacgcgctcgtcgacgccgcccaggccggcaagcaggtgctcgcg
gtcgtcgagatcaaggcgcgcttcgacgaggaggcgaacatcacctgggcgcgcaagctc
gagcgcgccggcgtgcacgtggtctacggcatcgtcggcctcaagacccacgcgaagctc
tgcctcgtcatccgccaggaatccaccggactcgtgcgctactgccacgtgggcaccggg
aactaccaccccaagacggcccgcgggtacgaggacttcggactgctcacccgcgacccg
gaggtcggccaggacctcaccaagctcttcaaccagctctccggctacgccccgcacgcc
gactactcccggctcctcgtcgcccccaaccgggtccgcgcgggcctcatcgagctcatc
gagtccgagaccgaacacgcccgggccgggcgtgaggggcggatccggatcaaggtcaac
tcgatcgtcgacgagccgatcatcgatgccctgtacctcgcctcgcgggccggggtgcgg
atcgagctgttcgtgcgcggcatctgcgccatccgccccgggatcccggggctgagcgag
aacatcacggtgcgctcgatcctcggccgctacctcgagcactcgcggatcttcgtgttc
ggcaccggcgaccggatggtcgcctacatcggctcggccgacctcatgcaccgcaacctc
gaccgccggatcgaggcgctcgtacggctgtccgccgccgagcacatcgcggaggtcgac
ggcctgttcgacctcgcgttcgccccgaccacctcctcgttccacctgggcgccggtggg
atctggtcccggcattcgcgcggcccggacggggagccgctcaccgactaccagtccgag
ctcatccgccggcaccaccggcgccgggcggtggaccgcgcatga
DBGET
integrated database retrieval system
