Brevibacterium sp. CS2: FDF13_11110
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Entry
FDF13_11110 CDS
T05958
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
bri
Brevibacterium sp. CS2
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bri03051
]
FDF13_11110 (pafA)
Enzymes [BR:
bri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
FDF13_11110 (pafA)
Proteasome [BR:
bri03051
]
Prokaryotic proteasome
Bacterial regulatory particles
FDF13_11110 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QCP05758
LinkDB
All DBs
Position
complement(2466328..2467800)
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AA seq
490 aa
AA seq
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MKRIFGLETEYGIAFTQGEGRRLGPEEIARYLFRPVVEWGRSSNVFLPNGARLYLDVGSH
PEYATAECDVLPDLLAQDAAGDAIMVDLLARAQAAMAADGVDGTAHLVKNNTDSAGNSYG
SHENLLVRRSMDFTHLTSVLLPFLVTRQLMVGAGAVIPRAVATDLRPADSNRAAPHSPHT
APTDPGRDLVYGLSARSDVMWEGVSSATTRSRPIINARDEPHADAEKYRRLHVIVGDSSM
TQTTTELKVGSAALVLDLIESGAPIRDLSLRNPIRDIRHVARDLTGRHVLELVSGERLTV
LELLSIYLERARALVAAGDHSLGSDASAARVIDLWTRILAAVESGDFTGVDTELDWVIKR
GLVQRYLQRSEAGLADPRIARLDFAFHDLTPGSGMLARLEAAGLAARVVPEDTVRAAVDA
PPATTRAAIRGRFVRAAHAARRDFTVDWVHLRLNDQLQRAVVLKDPFAASNDSADALIAG
LGEAPGAHSV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcggatcttcggcctcgagaccgagtacggcatcgcgttcacccagggcgagggg
aggcgcctcgggcccgaggagatcgcccgctacctgttccgaccggtcgtcgagtggggc
cggtcctccaacgtgttcctccccaacggcgcccgcctctacctcgacgtcggctcccac
ccggagtacgcgaccgccgagtgcgacgtgctgcccgatctcctcgcgcaggacgccgcg
ggggacgcgatcatggtcgatctcctcgcccgcgcccaggccgcgatggccgccgacggg
gtggacggcaccgcccacctggtgaagaacaacaccgactccgcagggaactcctacggc
agccacgagaacctcctcgtgcgccgctcgatggacttcacccacctcacctcggtgctc
ctgcccttcctcgtcacccggcagctcatggtcggcgccggggcggtgatcccgcgtgcg
gtcgccaccgacctccggccggccgactccaaccgcgccgccccgcatagcccgcacacc
gctcccaccgatccgggcagggacctcgtctacgggctgtcggcccgctccgacgtcatg
tgggagggcgtgtcctcggccaccacccgctcccggccgatcatcaacgcccgcgacgag
ccccatgccgacgcggagaagtaccgccgtctccacgtcatcgtcggcgactcctcgatg
acgcagacgacgacggagctcaaggtcggctccgccgcgctcgtcctcgacctcatcgag
tccggcgccccgatccgcgacctcagcctccgcaacccgatccgcgacatccggcacgtc
gcccgcgacctcaccggccgacacgtcctcgagctcgtgtcgggggagcgcctcaccgtg
ctcgagctgctctcgatctacctcgagcgggcccgcgcgctcgtggccgccggcgaccac
agcctcggctccgacgcgtccgccgcgcgggtcatcgacctgtggacgcggatcctcgcc
gccgtggagagcggggacttcaccggcgtcgacacggagctcgactgggtcatcaagcgc
ggcctcgtgcagcgctacctgcagcgctcggaggccgggctcgccgacccgcggatcgcg
cgcctcgacttcgccttccacgacctcaccccggggtccggcatgctcgcccgcctcgag
gccgcggggctcgccgcccgtgtggtccccgaggacacggtgcgcgccgccgtcgacgcc
ccgccggccacgacgcgcgcggcgatccgcggccggttcgtgcgcgcggcgcacgcggcc
cgccgcgacttcaccgtcgactgggtgcatctgcggctcaacgaccagctccagcgcgcc
gtcgtcctcaaggacccgttcgcggcatcgaacgactccgccgacgcgctcatcgcgggg
ctgggggaggctccgggcgcgcactcagtgtga
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