Brucella sp. 09RB8471: BKD03_06835
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Entry
BKD03_06835 CDS
T06323
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brj
Brucella sp. 09RB8471
Pathway
brj03030
DNA replication
brj03430
Mismatch repair
brj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKD03_06835
03430 Mismatch repair
BKD03_06835
03440 Homologous recombination
BKD03_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brj03032
]
BKD03_06835
03400 DNA repair and recombination proteins [BR:
brj03400
]
BKD03_06835
Enzymes [BR:
brj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKD03_06835
DNA replication proteins [BR:
brj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKD03_06835
DNA repair and recombination proteins [BR:
brj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKD03_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
APX69159
LinkDB
All DBs
Position
2:complement(172039..175530)
Genome browser
AA seq
1163 aa
AA seq
DB search
MNDTVAGNAASGSSATPGFVHLRVHSAYSLLEGALPLGKIIKQALADDAPAIAVTDTNNL
FGALEFAQKASKDGVQPIIGCQLDVAFGDHNDNSRSVNRKLALDLAPLVLIAATEAGYAN
IVRLVSRAFLDTPAGDPIHIEAGWLPALSEDVIALTGGPLGPIGRSFTADRADRARARLA
FLKETFGNRLYVELQRQAGYDRAVEASTVELAYEMDLPLVATNEAFFLKAEDFEAHDALL
AIAEGQILSNDDRRRLTPDHCLKSRAEMAELFADLPEALENTVEIAGRCSWYTQTRKPIL
PRFTGESDDPEAALQAEADELARQAREGLKKRLETAGLAEGYTPEQYAERLEYEIGIITR
MKFPGYFLIVADFIKWAKAHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNP
DRVSMPDFDIDFCQDRREEVIRYVQEKYGRDQVAQIITFGTLQARAVLRDVGRVLEMPYG
QVDRLCKLVPQNPANPVSLAQAIESEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHA
AGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLQTAVKLV
ARKGIDIDLSHLPLDDALTYEMLSRGETVGVFQVESAGMRKALLGMKPDRVEDIIALVAL
YRPGPMENIPTYNARKNGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIREEMDKQRVRFVDGAVERGVDKAQANMIFDLLAKFADYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTYDMSNTDKLNDFRREANRLGIEVVPPSVKTSFRPFE
VGEKKIFYSLAAIKGVGEAAVDHIVDVRAEKQFESLEDFCERIDPKIINRRVLESLINAG
AMDCFGRDRAAMCAGMDRILGFAQRTQENAVSGQSDIFGLSGAPRETLILPPTAPWLPSE
MLHREFQAVGFYLSAHPLDEYRDVLNRMRVQSWADFSAAVKRGASAGRLAGTVTARQERK
TRTGNKMGIVQLSDASGQFEAVLFSEGLAQYRDLLESGKSVVITVQAENRPEGIGLRIQT
VQSLEDEACRMQKAMRLYLRSADAVRHIAPHFNTRGDGQVSLIVIKDNGQREVEIELPHR
YRVSPQIASAMKAIQGVVEVELV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacggtagcaggaaacgcagcgagcggtagctctgctacgccgggtttcgtt
catctgcgggttcattccgcctattccttgctggaaggcgcattgccgcttggcaagatc
atcaaacaggcgcttgccgacgatgcgccggctatcgcggtcacggacaccaacaatctg
ttcggtgcgctggaatttgcgcagaaggcgtcgaaggatggcgtgcagccgattatcggt
tgccagcttgatgttgccttcggcgatcataatgacaatagccgcagtgttaaccgcaag
cttgcgctggatcttgcgccgcttgtcctgattgcggcaacggaagcaggctatgccaat
attgtgcggcttgtaagccgcgcatttctggatacgcctgctggcgaccctatccacata
gaggctggctggctgccggctttgtctgaggatgtaatcgcgctgaccggcggacctttg
gggccgatcgggcggtccttcacggcggatcgtgccgaccgcgcgcgcgcgcgcttggct
ttcctgaaggaaaccttcggcaatcgtctctatgtcgagttgcagcgccaggcggggtat
gaccgcgctgtggaagccagtacggtggaactggcttacgagatggatttgccactggtc
gcgaccaacgaggcttttttcctgaaagcggaggatttcgaggcgcatgatgcgctgctc
gccattgcggaaggccagattctctccaacgatgatcgccgccgcctgacgccggatcat
tgtctgaaaagccgcgcggaaatggcggaactttttgccgacctgccggaagcacttgag
aatacggtcgaaattgccggacgttgtagttggtacacgcagacgcgcaagccgatcctg
ccacggtttaccggcgagtccgacgatccggaagccgcccttcaggcagaagccgacgaa
cttgcgcgtcaggcgcgcgagggcctgaagaagcgtcttgagactgcgggccttgcggaa
ggctatacgccggaacaatatgccgaacgcctcgaatatgagatcggcatcatcacccgc
atgaagtttccgggctatttcctgatcgttgccgactttatcaaatgggccaaagcccac
ggcattccggtcgggccgggccgtggttccggtgccggttcgctcgtcgcctatgcgctg
accattaccgatgtcgatccgttgcgcttctcgttactttttgaacgctttctcaatccc
gatcgcgtctcgatgcccgacttcgatatcgatttctgtcaggatcgccgcgaagaggtg
atccgctatgtgcaggaaaaatacgggcgcgatcaggttgcacagatcatcacgttcgga
accttgcaggctcgcgccgtgctgcgtgacgttggccgtgttctggaaatgccatacggg
caggtggaccgcctctgcaagctggtgccgcagaacccggccaatccggtatcattggcg
caagccatcgaatccgagcctaagatcaatgaggagcgcgagaaggagccggtcgtcggc
cgccttctcgacatggcgctgaagcttgaagggctttaccgtcatgcatcgacccatgcc
gctggcatcgtgatcggtgatcgacctttgtctgagctggtgccaatgtatcgcgatccg
cgatccgacatgcctgtcacccagttcaatatgaagtgggtggagcaggcgggcctcgtc
aagttcgacttcctcggcctcaagacgctgaccgttcttcaaacggcggtcaagctggtg
gcgcgcaagggaatcgatatcgatctttcccacctgccgcttgatgatgcgctgacctat
gaaatgctgtcgcgcggtgaaaccgttggtgtgttccaggttgaaagtgcgggtatgcgc
aaggcgctgctcggcatgaagccggatcgtgtcgaggatattattgcgcttgtggcgctt
tatcgtccgggcccgatggagaacattccaacctataatgcgcgcaagaatggtgaggag
gagatcgcctccattcacccgaagatcgatcacctgatcaaggaaacgcagggcgttatc
gtctatcaggaacaggtgatgcagatcgcgcaggtgctttcgggctattcgctcggcgaa
gctgaccttctgcgccgcgccatgggcaagaagatacgcgaggaaatggacaagcagcgt
gtccgtttcgtggacggtgcggtcgagcgtggggtggacaaggcgcaggcgaacatgatt
ttcgatctgcttgccaagttcgccgactatggcttcaacaagtcgcacgcggcggcctat
gccatcgtttcctaccagacggcctatatgaaggcgcattacccggtcgaattcctcgcc
gcgtcgatgacctacgatatgtcgaataccgataagctcaacgatttccgccgcgaggcg
aaccgtctgggcattgaggttgtgccgccttcggtgaagacatcgttccgcccgtttgaa
gtgggtgagaagaagattttctattcgctcgcagccatcaagggtgtgggggaggcggct
gtcgatcatattgtcgatgtgcgtgccgagaaacagtttgaaagccttgaggatttttgc
gagcggattgatcccaaaattatcaatcgccgtgttctggaaagcctcatcaatgcaggc
gcgatggattgttttgggcgggaccgcgctgccatgtgcgccgggatggaccgcattctg
ggctttgcccagcgcacgcaggaaaatgccgtcagcggccagtctgatatttttggcctt
tccggcgcgcccagggaaacactcatcctgccgccgacagccccctggctgccatctgaa
atgctgcatcgcgagtttcaggcggtcggcttttatctgtctgcccatccactggacgaa
tatcgcgacgtcttgaaccggatgcgtgtgcaaagctgggctgatttttcagccgcggta
aagcgcggcgcaagcgcggggcgtctggccgggacggttacggcccggcaggagcgcaag
acccgcaccggcaacaagatgggtatcgtgcagctttccgacgccagcggccagtttgag
gcggtcctgttttcggaagggctcgcacaatatcgcgatctgttggaaagcggcaaatcg
gtggtaatcacggtgcaggcggaaaaccggcctgaaggcatcggattgcgcattcagact
gtccagtcgctggaagacgaggcttgccgtatgcagaaggctatgcgactctatctgcgc
tcggctgatgcggtccgccacatcgcaccgcatttcaatacacgcggtgacggacaggtg
agcctcatcgtcatcaaggacaacgggcagcgtgaggtggagatcgaattgccgcatcgc
tatcgcgtcagcccgcagatcgcgagcgccatgaaggctatccagggcgtcgtggaagtc
gagcttgtttag
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