Bradyrhizobium sp. SK17: CWS35_20710
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Entry
CWS35_20710 CDS
T05325
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CWS35_20710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brk03021
]
CWS35_20710
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_20710
Enzymes [BR:
brk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CWS35_20710
Transcription machinery [BR:
brk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CWS35_20710
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CWS35_20710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
AUC96399
LinkDB
All DBs
Position
4543820..4544839
Genome browser
AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLQVTPGSDASRFATVVAEPLERGFGQTLGNALRRILLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGAVTAGDIQ
TVGDVTVLNPDLQLCTLDDGAEIRMEFTVTTGKGYVAAERNRPEDAPIGLIPVDSLFSPV
RKVSYKVENTREGQILDYDKLTMTIETNGAITPEDAVAYAARILQDQLNVFVNFEEPRKE
VTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaagaactcattcgaccgaacaagctccaggtcacgccg
ggctcggacgcgagccggttcgccaccgtcgtcgccgagccgctcgagcgcggcttcggc
cagacgctcggcaacgcgctgcgccgcatcctgctgtcctcgctgcagggcgccgcggtg
cagtcggtgcacatcgacggcgtgctgcatgagttctcctcgatcgctggcgtccgcgag
gacgtcaccgacatcgtgctcaacatcaaggacatctcgatcaagatgcagggcgaaggc
ccgaagcgcatggtcgtgaagaagcagggcccgggtgccgtcaccgccggcgacatccag
accgtcggcgacgtcaccgtgctcaaccccgatttgcagctctgcacgctggacgacggc
gccgagatccgcatggagttcacggtcaccaccggcaagggctatgtcgccgccgagcgc
aaccgtcccgaggacgccccgatcggcctgatcccggtcgacagcctgttctcgccggtc
cgcaaggtctcctacaaggtcgagaacacccgtgagggccagatcctcgattacgacaag
ctgaccatgacgatcgagaccaacggcgcgatcacgccggaggacgcggtggcctatgcc
gcgcgcatcctgcaggatcagctcaacgtgttcgtcaacttcgaagagccgcgcaaggaa
gtcacgcaggagatcatccccgatctggcgttcaacccggcgttcctcaagaaggtcgac
gagctcgaactgtcggtgcgttcggcaaactgcctgaagaacgacaacatcgtctacatc
ggcgatctggtgcagaagtcggaagcggaaatgctccgcaccccgaacttcggccgcaag
tcgctgaacgagatcaaggaagtgctggcccagatgggtctgcacctcggcatggaagtg
ccgggctggccgccggagaacatcgacgagctcgccaagcgtttcgaggatcactactga
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