Brooklawnia propionicigenes: brsh051_21670
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Entry
brsh051_21670 CDS
T09125
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
broo
Brooklawnia propionicigenes
Pathway
broo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
broo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
brsh051_21670 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
broo03021
]
brsh051_21670 (rpoB)
03400 DNA repair and recombination proteins [BR:
broo03400
]
brsh051_21670 (rpoB)
Enzymes [BR:
broo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
brsh051_21670 (rpoB)
Transcription machinery [BR:
broo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
brsh051_21670 (rpoB)
DNA repair and recombination proteins [BR:
broo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
brsh051_21670 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BEH02886
UniProt:
A0AAN0K8W1
LinkDB
All DBs
Position
2379109..2382597
Genome browser
AA seq
1162 aa
AA seq
DB search
MATSRNASKNTNVISTSGRISFAKIAEPLQVPNLLDLQIDSFNWLIGSEAWQQKTEQALA
EGRTDVNTRSGLEEIFDEISPIEDFNQTMSLSFRDHRFEEPKHSIEECKDRDTTYAAPLF
VTAEFMNNETGEIKSQTVFIGDFPLMTDKGTFIVSGTERVVVSQLVRSPGVYFEQTPDKT
SDKDIFTCKVIPSRGAWLEFEIDKRDQVGVRLDRKRKQNVTVLLKALGWSEDRILEQFGQ
YESIRMTLEKDHVTTQDEALLDIYRKLRPGEPPAREAAEQLLTNYYFNPKRYDLAKVGRY
KINQKLGLNLPFDMQVLTIDDIVAAIDYICALHEGKAEIEREGGETVIVEADDIDHFGNR
RLRTVGELIQNQLRTGLGRMERVVRDRMTTQDIEAITPSTLINIRPVTAALKEFFGTSQL
SQFMDQNNPLAELTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGL
IGSLASFARVNAFGFIETPYRKVIDGRVTDQIDYLTAGEEDRYNIAQANAELNSTGHFTE
DRVLVRVRHGDADTVPASEVGYIDVSPRQMVSVATALIPFLEHDDASRALMGANMQRQAV
PLIRSEAPYVGTGMEYRAAVDVGDVTLAQRPGVVTSVSADLIDVANDDGTYQTFRLEKFR
RSNAGTCVNQRPMVSPGDRVDVGTPLADGPCTDNAELALGRNLLVAFMPWEGLNYEDAII
LNQRIVSEDILTSIHIEEHEVDARDTKLGPEEITRDIPNVSDDMLANLDERGIIRIGAEV
GTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGENGTVIGVRVFDRE
EDDELPPGVNQMVRVYVAQKRKVQEGDKLAGRHGNKGVISKILPAEDMPFLPDGTPVDII
LNPLGVPSRMNVGQVLETHLGWIAHSGWDINDVDSDWAERLREVGLGTVEPNSRLATPVF
DGADEDEIGGLLANGLPNRDGERMVNADGKATLFDGRSGEPFPEKVGVGYMYMLKLHHLV
DDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAWALQEMLTIKSDDVP
GRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLSSDGAVVELRDSEDDYRSQ
DDLGIDLSRRPGADSFAIADEV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggccacctcgcgcaatgcgtcgaagaacaccaacgtcatctccaccagcggccgcata
tcgttcgccaagatcgctgagccgttgcaggtaccgaatctgctcgacctgcagatcgat
tcgttcaactggctgatcggcagtgaggcctggcagcagaagacggagcaggctctcgca
gagggccgtactgacgtgaacaccaggtccggcctggaggagatcttcgacgagatcagc
cccattgaggacttcaatcagacgatgtcgctgagcttccgcgaccatcgcttcgaggag
cccaagcacagcatcgaagaatgcaaggatcgcgacaccacgtacgcggccccgctgttc
gtgaccgccgagttcatgaacaacgagaccggcgagatcaagagccagaccgtcttcatc
ggtgatttcccgctgatgaccgacaagggcaccttcatcgtcagcggcaccgagcgcgtc
gtggtcagccagctggtccgttcgccgggcgtctacttcgagcagacccccgacaagacc
tccgacaaggacatcttcacctgcaaggtgattccttcgcgtggcgcgtggctggagttc
gagatcgacaagcgcgaccaggtcggcgtgcgcctcgaccgcaagcgcaagcagaacgtc
accgtgctgctcaaggcgctgggctggagcgaggaccgcatcctcgagcagttcggtcag
tacgagtcgatccggatgaccctggagaaggaccacgtcaccacccaggacgaggcgctg
ctcgatatctaccgcaagctgcgtccgggcgaaccgccggcccgcgaggccgccgagcag
ctgctgacgaactactacttcaatccgaagcgctacgacctcgccaaggtcggccgctac
aagatcaaccagaagctgggactgaacctgccgttcgacatgcaggtgctgaccatcgac
gacatcgtcgcagcgatcgactacatctgcgccctgcacgaaggcaaggccgagatcgag
cgcgagggcggcgagaccgtcatcgtcgaggcggacgacatcgaccacttcggcaatcgt
cgtctgcgcaccgtcggtgagttgatccagaaccagctgcgcaccggcctgggacgcatg
gaacgggtcgtccgcgaccggatgaccacgcaggacatcgaggcgatcacgccgtcgacc
ctgatcaacatccgtccggtgaccgctgccctgaaggagttcttcggcacctcgcagttg
agccagttcatggaccagaacaatccgctggccgagctgactcataagcgccgcctgtcg
gctctgggccccggtggtctgagccgtgaccgggccggtatggaagtccgcgacgtgcac
ccctcgcactacggacgcatgtgtcccattgagacccctgaaggcccgaacatcggcctg
atcggttcgttggcctccttcgcccgggtgaatgcattcggcttcatcgaaaccccgtac
cgcaaggtcatcgacggtcgggtcaccgaccagatcgactacctgaccgccggggaggaa
gaccgctacaacatcgcgcaggccaacgcggagctgaactccaccggccacttcaccgag
gaccgcgtcctggtgcgcgttcgccacggtgatgccgataccgtgccggccagcgaggtc
ggctacatcgacgtgtccccgcgccagatggtgtcggtcgcgaccgcgctgatcccgttc
ctcgagcacgacgacgcatcgcgtgccctgatgggcgccaacatgcagcgccaggccgtc
ccgctgatccgcagcgaggctccctacgtcggcacgggcatggagtaccgcgccgctgtc
gacgtcggcgatgtcacgctggctcagcgtcccggtgtggtcaccagcgtctcggccgat
ctcatcgatgtggccaacgacgacggcacctaccagaccttccggctggagaagttccgt
cgctcgaacgcgggtacctgcgtcaatcagcgtccgatggtctcgcccggcgaccgtgtc
gacgtcggcacgccgctggccgacggcccctgcaccgacaacgccgaactggccctgggt
cgcaacctgctcgtcgcgttcatgccctgggagggcctgaactacgaggacgcgatcatc
ctcaaccagcgcatcgtgagcgaagacatcctcacctcgatccacatcgaggagcacgag
gtcgacgcccgcgacaccaagctgggtcccgaagagatcacccgcgacatcccgaacgtg
tccgacgacatgctcgccaacctcgacgagcgcggcatcatccgcatcggcgccgaggtc
ggcaccggcgacatcttggtcggcaaggtcaccccgaagggcgagaccgagctcactccc
gaggagcgcctgctgcgcgccatcttcggcgagaaggcccgcgaggtccgcgacacctcg
atgaaggtgccgcacggtgagaacggcacggtcatcggcgttcgcgtgttcgaccgcgaa
gaggacgacgaactgccccccggcgtcaaccagatggtgcgggtctacgtcgctcagaag
cgcaaggtgcaagaaggcgacaagctcgccggccgccacggcaacaagggtgtcatctcc
aagatcctgcccgccgaggacatgccgttcctgccggacggcaccccggtcgacatcatc
ttgaacccgctgggtgtgccctcgcgtatgaacgtgggccaggtgctcgaaacgcacctc
ggctggatcgcccactccggctgggacatcaatgatgtcgacagcgactgggcggagcgg
ctgcgcgaggtcggtctgggcaccgtcgagccgaactcgcggctggcgaccccggtattc
gacggtgccgacgaggacgagatcggtggtctgctggcgaacggcctgcccaaccgtgac
ggtgagcgcatggtcaacgccgacggcaaggcgacgttgttcgacgggcgctccggtgag
ccattcccggagaaggtcggcgtgggctacatgtacatgctgaagctgcaccacctggtc
gacgacaagatccacgcgcgctccaccggcccgtactcgatgatcacccagcagccgctg
ggtggtaaggcgcagttcggcggccagcgcttcggtgagatggaagtgtgggccttggag
gcgtacggcgccgcctgggccctgcaggaaatgctcaccatcaagtccgatgacgtgcct
ggtcgcgtcaaggtctacgaggcgatcgtcaagggcgagaacattcccgagcccggcatc
cccgaatcgttcaaggtgctcgtcaaggaaatgaagtccttgtgcctgaacgtcgaggtg
ctcagcagcgatggcgcagtcgtcgagttgcgtgacagcgaggacgactaccgctcgcaa
gacgatctgggtatcgacctgtcgaggcgtccgggtgctgactcgttcgccatcgccgac
gaagtctga
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integrated database retrieval system
