Bacillus rossius redtenbacheri: 134528570
Help
Entry
134528570 CDS
T09888
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04512
ECM-receptor interaction
bror04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134528570
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134528570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bror00535
]
134528570
Proteoglycans [BR:
bror00535
]
Extracellular matrix (ECM) proteoglycans
Others
134528570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134528570
NCBI-ProteinID:
XP_063218383
LinkDB
All DBs
Position
1:complement(367594033..367911889)
Genome browser
AA seq
1042 aa
AA seq
DB search
MASPALELRRAGARGGQLAALLPLTLLCMAFFASAQDDNSVLAPEERRGPCADFRPGEDD
LQAFDFIRTFRLDVPDTSYPGVTRVKGSNRMQTAYRLDRDADLTLPTRRVFPLGLPEQFS
FITTFKTRKVAKSPWHIIRISDVEGKPQFLVTLNPKKQTVELSTVSAQNRLQTVAFKRPQ
VFDKGWHKIHFGVFSDEVVLYVDCMLTPRQRIQRRGPIDTNGLITISKVTGGRQVVPIDL
QWMVLSCDPTRPERESCDELPVTAVRATSPPCETVCPQGPPGFNGTNGLPGPAGPPGPIG
EQGFPGFAGSPGPRGPAGRPGSPGPRGLTGERGPRGLQGPAGLLGAPGQPGARGEKGDRG
DRGPKGDRGSDGTPGVPGTDGRPGLPGPPGQAVVNGTSAPGPPGPAGVPGAPGAAGPPGP
EGAAGRRGPPGEPGERGPAGRDGSDGERGLKGDSGAPGPPGERGPVGPAGPAGVPGQPGR
QVDGETVPGLPGPAGPPGEPGTPGPPGPEGSKGSQGDRGEKGPRGDQGERGLAGTPGQDG
LRGESGSEGPAGSAGDKGEPGLPGSPGVQGPPGLVGLPGPSGAAGVPGLKGDAGEPGEPG
LPGSAASAGDPGPQGPAGPPGPQGEDGAPGEPGPQGEAGPSGEAGAPGIPGREGLQGEEG
EVGPPGAKGEQGPRGKEGPQGPEGKTGPRGFLGAAGPKGDSGDPGLQGPVGPRGLPGNMG
APGAPGGPGPSGLPGLVGPAGAVGPAGPPGPPGDSGYAPSNLLVSEGDGLPGVAGPRGPS
GPPGLPGERGAAGERGPEGQPGVMGMPGKDGAPGNPGPPGQRGQSGMPGLPGPPGRSFTE
AEVRDICAAVLRDQLTELTESLVGPPGPPGRSRPGRPGAHGLQGAPDRLDELTSGLRGPP
GPPGISRHGRVGRRGPPGIPGDRGPPGLPGERGFTGLPGPSGPAGPPGARGEMGEKGDRG
PEGVGVEGPMGPRGVPGPTGPEGVGLPGREGERGEPGRPGTPGLRGTPGAQGPPGYCEFC
NYPGNNVIHTVVPRQGGTTKGL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccggcgctggaactgaggcgcgccggagcccgcggcggtcagctggccgcc
ctgctgcctctgacgctgctctgcatggccttcttcgcctctgcccaggacgacaacagc
gtgctggcgccggaagagcgccgcgggccctgcgccgacttccggccgggcgaggacgac
ctgcaggccttcgacttcatccgcacgttccggctggacgtgccggacaccagctacccg
ggcgtgacgcgcgtcaagggctccaaccgcatgcagacggcgtaccgcctggaccgcgac
gccgacctcacgctccccaccaggcgggtgttccccctggggctgccggagcagttctcc
ttcatcaccaccttcaagacgcgcaaggtggccaagagcccgtggcacatcatccgcatc
tctgacgtggagggcaagccgcagttcctcgtcaccctcaaccccaagaagcagaccgtg
gagctgtccacggtcagcgcccagaaccgcctgcagaccgtcgccttcaagaggccgcag
gtgttcgacaagggctggcacaagatccacttcggggtgttcagcgacgaggtggtgctg
tacgtggactgcatgctgacgccccggcagaggatccagcggcgaggccccatcgacacc
aacggcctcatcaccatctccaaggtgaccggcgggcggcaggtggtcccgatagatctg
cagtggatggtgctgagctgcgacccgacccgtcccgagcgggagtcctgcgacgagctc
cccgtcactgcggtccgcgctacgtcgcctccttgcgagacggtctgcccccagggccca
cctggcttcaacggaaccaacggcctgccaggacctgccggcccgcccggaccaatagga
gagcagggcttcccggggttcgcaggcagccccggaccgcgcggcccggccggccggccc
ggctcaccgggtccgcggggcctgacgggggagcgaggcccccggggactgcagggacct
gccggactgctgggcgccccgggacagccgggagccagaggagagaagggggaccgcggg
gaccgcgggcccaagggagaccggggcagcgacggcacgccgggtgttcccgggacggac
ggccgccccggactgccagggcccccggggcaggccgtggtcaacgggaccagcgctccg
ggccccccggggccggccggcgtccccggcgcgccgggcgcagccgggccgcccggtccc
gagggcgcggcggggagacgcggcccgccgggggagcccggggagcgcgggccggcgggc
agggacggcagcgacggggagcgcgggctgaagggggacagcggggcgccgggaccgccc
ggagagaggggccctgtcggcccggcgggtccggcgggcgtcccgggccagcccggccgg
caggtggacggggagacggtcccagggctccctggtcccgcgggaccccccggggagccc
gggacaccgggaccgcccgggcccgaaggcagcaagggctcgcagggcgaccgcggcgag
aaggggcctcgcggagaccaaggggagcggggtctcgcggggacgccgggacaggacgga
ctgcgaggggagtccgggagcgaaggtcctgccgggagcgctggcgacaagggtgagccc
ggactcccggggtcgcccggcgtgcaaggcccgccgggactcgtcggcctgccgggtccg
tcgggggcggccggcgtcccggggctgaagggcgatgcaggggagcccggggagccaggg
ctgcccgggtcggcggcctcggcgggagacccgggaccgcagggccccgcgggacctccc
gggccccagggcgaggacggggcgccgggcgagccggggccccagggggaggcggggccc
tccggggaggccggcgctcccgggatacccgggcgcgagggccttcagggcgaggagggc
gaggtgggtcccccaggagcgaagggcgaacaaggaccaagagggaaagaaggacctcag
ggaccagaagggaagaccggacctcgtgggttcctgggagcagccgggccgaagggcgac
tccggtgatccgggactgcaaggtcccgtgggaccacgaggactgcctggtaacatggga
gcccccggagcgccgggcggccccggaccgtccggtctgccgggactggtgggcccagcg
ggggcggtggggcctgccgggcccccgggcccccccggggacagcggctacgccccgagc
aacctgctggtgtcggagggcgacggcctgccgggcgtcgccggacccagagggccgtcc
gggcccccgggactgcccggggagcgcggcgcggctggggagcgcggcccggaggggcag
cccggagtgatggggatgcccgggaaggacggcgccccgggcaaccctggccccccggga
cagagggggcagtccggcatgccgggcctgccgggacccccgggacggagcttcacggag
gcggaagtgcgagacatctgcgcagctgtgctccgagaccagctcacggagctgacggag
tcgctggtgggacctccggggcccccgggacgcagccggccgggacgtcccggcgcccac
ggactgcagggagcgccagatcgtttggatgagctaacctcgggactgcgtggtccgccg
ggccccccagggattagccggcatggtcgggtggggcgtagaggcccccctggcatccca
ggtgaccgaggcccgcccgggctcccgggagagcggggcttcacgggcctgcccggtccc
tcgggccccgccgggccgccgggcgcccgtggcgagatgggcgagaagggcgaccgcggg
ccggagggcgtcggagtcgagggccccatgggcccgcgcggagtcccgggacccacgggg
ccggagggcgtcggcctgccaggtcgcgagggcgagcgcggggagccgggccgaccaggg
acgccaggtctgcgtgggaccccgggagcccagggtcctccgggctactgcgagttctgc
aactacccggggaacaacgtcatacatacggtggtcccgcggcaaggcggcaccaccaag
ggcctgtga
DBGET
integrated database retrieval system