Bacillus rossius redtenbacheri: 134533664
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Entry
134533664 CDS
T09888
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134533664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134533664
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134533664
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134533664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
134533664
NCBI-ProteinID:
XP_063227279
LinkDB
All DBs
Position
7:complement(7514644..7752945)
Genome browser
AA seq
2376 aa
AA seq
DB search
MNLDSLSFALSQISYLVTNLTKKNFKQSCQELSHLVWTHGQEADRHLLRCLFSHIDFSVE
GSKRDRDGQNAHAQLLAQECTALLTKPALVANLCHAVDNPLHHQKTLKPSPQLFVQLSKV
LKLKPVQEVVFGLALLRSSNPDTQSFATQFVKARLPDLIRSYIDTESSSSQQDGGLHDAT
PEVLQIILSSLLHGPKDLFGISVDTKEALLKSVRRDFPRELVPIVLAPLLYPASADLPMD
KVNQDGAAMTNAVHTGSLAELMAEVGYSFCSSVEECRANLASVGGARELTPPAVARALAM
MARTHSGLEERAPLQATPFWGPEPTKDKPSSAADPTSWNIEVFVQALKELVPGLAWSEVA
LELDHAEFLVKDRAGLSLLVTGLRLGLQGQGFRPELFPVDFLYRHWSNVDGQLSLVQLAV
KHPDVLGLTDLPLRSVPVDVLKAPPEADNKEAGVWRSLDLLETLLWLAERGLHAPVQELL
KLPAQQCPDVLVLALLHAGPPVTALRNELLSGLVPVFLANHPNSAVILHHAWHFQDMNIK
PIVMHSMAEWYIRNENDQSRLSRILDVAQDLKALTMLLNVQSYPFVIDLACLASRREYLK
LEKWLADKIREYGEPFVSACVKFLQRRCPQIMGGMVKEDSVPKSAQLPHETLAVMLSCLQ
NCTGNVSQELSDVIFTMVTNCTVLLKSRQPPPGVMRTHRNLEQAFNPSSISGQLFTGPQV
DSMGSIGSSLAGMSLGAGAGSSAFNLPGALGPLVSTPGSPSRLLGQGTSPGPFPLIQLQH
GGPVGAGARVAPPPGALDKRLAPETANLFPDMPQNVSKEIEDEANSYFQRIYNHPPHPTL
SIDEVLDMLKKFQDSPNKREREVFQCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIERG
LVSSYMVLGLALRCVLDALKKSSSSKMYYFGIAALDRFKSRLKDYHKYCGHVASIAHFSE
FPPHLVEYVEYGLQSQEPPSRPQGSVQAALTAYKPSTSVAPATTAPGTASKSSGPAPSIA
SRPSIANATNIDTLLVATEKEEKMTAPPEALQDKIGFVFNNLSQLNLQTKCDELRDIVTE
EYWPWMSQYLVMKRASIELNFHTLYSNFLDVLKIPELNQMVLCETYRNIKVLLRSDKGIA
NFSDRSLLKNLGHWLGMLTLAKNRPILHVDIDLKALLAEAFHKGQQELLYVVPFVAKVLE
SCAKSKVFKARNPWTMSIMSVLAALHQLQDLKLNLKFEIEVLCKNLNIDVSELKPSPYLK
DQEKLRNLEYQLSHPNKKQETLVVQNVSPPPVKQHHGNHGGEEGPVSPPTPATPAAPITT
TPTSSLPAGPPEPRFSYMDLNVTSVNTIAPHITINSQLALFQANPHLKQCVRQAVERAIQ
EWIHPVVDRSIKIALTTCEQIVKKDFALDPEETRIRAASHHMVRNLTAGMAMITCRDQVM
VSISTNLKTSLLSALMGPTQQQKELVEQTAGLLAQENMELACAFIQKTAIEKAIPEIDKR
LLNEFELRKHARNEGRRYCDPQVLTYQAERMPEQIRLKVGGVSPQQMAVYEEFARNIPGF
LPLSERDAAIFIPKPVSHESTTAITPFVSTGPSQLQTYGTDDIGSVYDKLMSDLDLYLQC
LMGSQGVMSSSSCVSRLHSLLEALALARRHRDVVSATSLIQKAVDGLMELLPPGSGDQEL
VARCRDIHLRVLKALQDPRAYGMQWTNKQVTRCLMESRDELRYNLDVVDCLIRSQLVNLA
QYDVHVMQLMDNGLNYMAVIFAMQLVQIYLLEDRHSSAVGESDLCNCIDMLVRIATLNPR
PPDGLTNLIDRLKANHDPAILVDRAQGGPTAHIHSSILQVRASDFDDPPALVEKTDFLMR
EWVNLYHSPSAARDQTRTFSMFVQQLNQHGILKTDDLITRFFRLSTQMCVDMCYRTMSEL
SQSHTMVRAKCFHTLDAFVRLIALLVKHSGDSSNTGTKINLLNKVLGIVAGVLLQDHENR
LTEFQQLPYHRIFIMLLLELNGPEAILEAINFQVLTAFTHTLHILRPAKASGFAYAWLEV
VAHRVFVGRMLALTPQQKGWGLYSQLLVDLFRFLAPFLRNAELAKPVTLLYKGTLRVLLV
LLHDFPEFLCDYHYTFCDVVPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEITHA
PRVIANFSTSIQPLSFKKDLDSYLKARAPVTFLSELRSSLQVSSEPGLRYNIQLMNALVL
YVGTQAISFIRNKGLTPTMTTIAHSSHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWNH
EFVHCAPEIEKLFESVARSCMVQKQLLTNPESELGE
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcattgtcttttgccttgtcacaaataagttatttggttacgaatttg
acgaagaaaaatttcaagcaaagttgtcaagaattatcacatctggtgtggacccacggc
caggaagcggacagacacttgctgcgctgcctgttctcgcacatcgacttcagcgtcgag
gggagcaagcgcgaccgggacggccagaacgcccacgcacagctgctggcccaggagtgc
acggcgctgctcaccaagcccgcgctcgtcgccaatctctgccacgccgtcgacaacccc
ctccaccaccagaagactctgaagccatcgccgcagttgttcgtccagctgagcaaggtt
ttgaaactgaaaccagttcaagaagtcgtgtttggattggcgcttctacgttcttcaaac
ccggacacacagagcttcgcaacacagtttgtgaaagcccgcctaccagacttgatacga
tcgtacatcgatactgagagcagctcgagccaacaggacggaggcctccacgacgccacg
cccgaggtcctgcagatcatcctgagcagcctgttgcacggccccaaagacctctttggc
atttctgtggacacgaaggaagcacttctcaagagcgtgcgacgagatttccctcgggag
ctggtgcccattgtgttggcaccgctgctctaccctgccagtgcggacctgcctatggac
aaagtgaaccaggacggggcggccatgacaaatgcagtgcacacggggtcgctggccgag
ctgatggcggaggtgggctacagcttctgcagcagcgtggaggagtgccgcgccaacctg
gccagcgtgggcggggcccgagagctcacgccccccgcggtggcccgcgccctcgccatg
atggcgcgcacgcactcgggcctggaggagcgggcccccctgcaggccacgcccttctgg
ggcccggagcccaccaaggacaagcccagctccgccgccgaccccacctcctggaacata
gaggtcttcgtgcaggccttgaaggagctggtgccgggcctggcctggagcgaggtggcg
ctggagctggaccacgcagagttcctggtgaaggaccgcgccggcctcagcctgctggtg
accggcctgcgtctcgggctgcagggccagggcttccggccggagctcttccccgtcgac
ttcctctaccgccactggagcaacgtggacggacagttgtcgctggtgcagctggcggtg
aagcatcccgacgtgctgggcctgaccgacctgcccctgcgctcggtgcccgtggacgtg
ctcaaggccccgcccgaggcggacaacaaggaggcgggcgtgtggcgctcgctggacctg
ctggagaccctgctgtggctggcggagcgcggcctgcacgccccggtgcaggagctgctg
aagctgccggcccagcagtgccccgacgtgctggtgctggcgctgctgcacgccggcccg
cccgtcaccgcgctgcgcaacgagctgctgtcgggcctcgtgcccgtgttcctggccaac
caccccaactccgccgtcatcctgcaccacgcctggcacttccaggacatgaacatcaag
cccatcgtgatgcactcgatggcggagtggtacatccgcaacgagaacgaccagagcagg
ctgtcgcgcatcctggacgtggcccaggacctgaaggcgctgacgatgctgctcaacgtg
cagtcctacccgttcgtgatcgacctggcgtgcctggcctcgcggcgcgagtacctcaag
ctggagaagtggctggccgacaagatccgcgagtacggggagcctttcgtgtccgcctgc
gtcaagttcctgcagcgacgctgcccacagatcatgggtggcatggtgaaggaggacagc
gtccccaagtcagcccagctgccccacgagacgctggccgtcatgctcagctgcctgcag
aactgcaccggaaacgtgtcccaggagttgtcggacgtgatcttcacgatggtgacgaac
tgcacggtgctgctgaagtcgcggcagcctccgccgggcgtgatgcgcacgcatcgcaac
ctggagcaggccttcaacccctcctccatcagcggccagctgttcacgggcccgcaagtg
gactcgatgggcagcatcgggtcgagcctggcaggcatgagcctgggcgcgggcgcgggc
agctcggccttcaacctgcccggggcgctggggccgctggtgtccacgccgggctccccc
tcgcgcctgctgggccagggcacctcgccgggccccttcccgctcatccagctgcagcac
ggcgggccggtgggcgccggcgcccgcgtcgccccgccgccgggcgccctcgacaagcgc
ctcgcccctgagactgcaaacctgttccccgacatgccccagaatgtttccaaggagata
gaggacgaggcaaacagctacttccagaggatttacaaccacccgccgcaccccacgttg
tcgatcgacgaggtgctggatatgctcaagaagttccaggactccccgaacaagcgcgag
agggaggtgttccagtgcatgctgcgtaacctgtttgaggagtacaagttcttccctcag
taccccgacaaggagctgcacataactgcacagttgttcggtggcatcatagagcgcggc
ctcgtcagcagctacatggtgctggggctcgcgttgcgctgcgtgctggacgcactcaag
aagtccagctccagcaagatgtactacttcggcatagccgcgctggaccgcttcaagtcg
cgcctcaaggactaccacaagtactgcggccacgtcgcctccatcgcgcacttcagcgag
ttcccgcctcacctcgtggagtacgtggagtacgggctgcagtcccaggagccgccgagc
cggccccagggcagcgtgcaggcagcactgactgcctacaagcccagcacgtccgttgcg
cccgccaccaccgcgcccggcaccgcctccaagtcctcggggcccgcccccagcatcgcc
agccgcccgtccatcgccaatgctaccaacatcgacacgctgctggtggccacggagaag
gaggagaagatgactgccccgccagaggcgctccaggacaagataggcttcgtgttcaac
aacctgagccagctgaacctgcagaccaagtgcgacgaactgcgagacatagtgacggag
gagtactggccgtggatgtcccagtacttggtgatgaagcgggctagcattgagctcaac
ttccacacgctctactccaacttcctggacgtgctgaagatcccggagctgaaccagatg
gtgctgtgcgagacctaccgcaacatcaaggtgctgctgcgcagcgacaagggcatcgcc
aacttctcggaccgctcgctgctgaagaacctgggccactggctgggcatgctgacgctg
gccaagaaccgccccatcctgcacgtggacatcgacctgaaggcgctgctggccgaggcc
ttccacaagggccagcaggagctgctgtacgtggtgcccttcgtggccaaggtgctcgaa
tcctgcgccaagagcaaggtttttaaggccaggaacccttggactatgtcaataatgagt
gtcttggctgccctacaccaattgcaagacctgaaactaaatctcaagtttgagattgaa
gtgctctgcaagaacctcaacattgatgtgtcggaactgaagccctcgccctacctgaag
gatcaggagaagctgcggaacctggagtaccaactgtcgcaccccaacaagaagcaggag
acactggtggtccagaacgtctccccaccacctgtcaagcagcatcatgggaaccacggc
ggggaggaggggccggtgtcgccccccaccccggccacccccgcggctcccatcaccacc
acccccacctccagcctgccggccggcccgcccgagccccgcttcagctacatggacctg
aacgtcacctctgtcaacaccatcgccccgcacatcaccatcaacagccagctggccttg
ttccaagcgaacccgcacctgaagcagtgcgtgcgtcaggcggtggagcgcgccatccag
gagtggatccaccccgtcgtggaccgctccatcaagatagccctcaccacctgcgagcag
attgtcaagaaggactttgccctggacccggaggagacacggatccgtgcggcgtcccac
cacatggtgcgcaacctgactgcgggcatggccatgataacctgccgtgaccaggtcatg
gtgtctatcagcaccaacctcaagaccagcctgctgtctgcgctaatgggccccacgcag
cagcagaaggagctggtggagcagacggccggcctgctggcccaggagaacatggagctg
gcctgtgccttcatacagaagactgccatcgagaaggccatccccgagatagacaagcgc
ctcctcaacgagtttgagctgcgcaagcacgctcgcaacgagggacggcgctactgcgac
ccgcaggtgctcacgtaccaggcggagcgcatgcccgagcagatacgcctcaaggtgggc
ggcgtgtcgccccagcagatggccgtgtacgaggagtttgcccgcaacatcccgggcttc
ctgcccctcagcgagcgggacgcggccatcttcatccccaagcccgtcagccatgaatca
acaactgcaataacaccatttgtgagcactggaccgtcacagctgcagacgtacggcacg
gacgacatcggcagcgtgtacgacaagctgatgagcgacctggacctgtacctgcagtgc
ctgatgggctcgcagggagtgatgtccagctcctcctgcgtgtcgcgcctgcacagcctg
ctggaggccctggcgctggcccggcgccaccgcgacgtcgtctccgccacctccctcata
cagaaggcggtggatgggctgatggagctgctgccccccggctcgggcgaccaggagctg
gtggctcgctgccgagacatccacctgcgcgtgctcaaggcactgcaggacccgcgcgcc
tacggcatgcagtggaccaacaagcaggtcacccggtgcctaatggagagccgggacgag
ctgcgctacaacctggacgtggtggactgcctgatccgctcgcagctggtcaacctggcg
cagtacgacgtgcacgtgatgcagctcatggacaacgggctcaactacatggccgtgatc
ttcgccatgcagctggtgcagatctacctgctggaggaccgccacagctccgccgtgggc
gagagcgacctgtgcaactgcatcgacatgctggtgcgcatcgccaccctcaacccgcgc
ccccccgacgggttgacgaacctgattgaccggctgaaggcgaatcacgatcctgcgatc
ctggtggaccgggcccagggcgggcccacagcccacatccactccagcatcctgcaagtg
cgggccagcgacttcgacgacccaccggcgctggtggagaagacggacttcctgatgcga
gagtgggtgaacctgtaccacagcccctcggccgctcgcgaccagacccgcaccttcagc
atgttcgtgcagcagttgaaccagcacggcatcctgaagacggacgacctgatcacgcgc
ttcttccgcctgagcacgcagatgtgcgtggacatgtgctaccgcaccatgtcggagctg
agccagagccacacgatggtgcgagccaagtgcttccacaccctggacgccttcgtgcgc
ctcatcgcgctgctggtgaagcactcgggagactcctccaacaccggcaccaagatcaac
ctgctcaacaaggtgctgggcatcgtggcgggagtgctgctgcaggaccacgagaaccgc
ctcacagagttccagcagctgccgtaccaccgcatcttcatcatgctgctgctggagctg
aacggcccggaggccatcctcgaggccatcaacttccaggtgctaacggcgttcacacac
acgctgcacatcctgcggccggccaaggcgtcggggttcgcctacgcgtggctggaggtg
gtggcccaccgggtgttcgtggggcgcatgctggccctcacgccgcagcagaagggctgg
ggcctgtactcgcagctgctggtggacctgttccgcttcctggcgcccttcctgcgcaac
gcggagctggccaagcctgtcacgctgctgtacaagggcacgctgcgagtgctgctggtg
ctgctgcacgacttccccgagttcctgtgcgactaccactacaccttctgtgacgtcgtg
ccgcccaactgcattcagatgcgcaacttgattctgtcggcattcccgcggaacatgagg
ctgccggacccgttcacgcccaatctgaaggtggacatgctccccgagataactcacgct
ccgagagtgattgccaacttctccaccagcatccagccactcagcttcaagaaggacctg
gactcgtacctgaaggcgcgggcgcccgtcaccttcctgtcggagctgcgcagcagtctg
caggtgtccagcgagccgggcctgcgctacaacatccagctgatgaacgccctggtgctg
tacgtgggcacccaggccatcagcttcatccgcaacaagggcctcacgcccaccatgacc
accatcgcgcactcctcgcacatggacatcttccagaacctggccgtcgacctggacacc
gagggtcgctacctgttcctgaatgcgatagccaaccagctgaggtaccccaacagtcac
acgcactacttcagctgcacgctgctctacctgtttgctgaggccaacacggaagccatt
caggagcagatcacccgggtgctgctggagcgactgatcgtgaaccggccgcacccctgg
ggcctgctcatcaccttcatagagctcatcaagaaccccacctacaagttctggaaccac
gagtttgtgcactgcgcccccgagatcgagaagttgttcgagtcggtggctcgatcgtgc
atggtgcagaagcaactgctcaccaaccctgagagcgaactgggagagtag
DBGET
integrated database retrieval system
