Brassica rapa (field mustard): 103844802
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Entry
103844802 CDS
T03449
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103844802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103844802
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103844802
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
CDC45
Sigma70_ner
Pox_Ag35
Nop14
DUF5427
PBP1_TM
RR_TM4-6
DUF4746
Motif
Other DBs
NCBI-GeneID:
103844802
NCBI-ProteinID:
XP_009119864
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Position
A10:complement(9514478..9524242)
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AA seq
356 aa
AA seq
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MQEIIPDFLEECEFVDTSLAGDDLFAILESLEGAGEISSTAASTPKDGTTSSKELVKNQN
HETSSPKKKRKRLETGKEEEEDDDDGEGEEEEEEDEDNKQDGQQKMSHVNVERNRRKQMN
EHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVP
SPRPSPNVLSPRKPPLSPRISHHHLLLPPISPRTPLPTSPYGAHPPQLPLIPQPPRSYCL
GDPPPYSPASSSSSPSVSSNHESSLINELVANSKSALADVEVKFSGANVLLKTVSHKIPG
QVMKIIAALQDLSLEILQVNINTVEETMLYSFTIKIGVECQLSAEELAQQIQQTFC
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagataataccggattttcttgaagaatgtgaattcgtggacacttcactagcc
ggagatgatctgtttgctatcttagagagtcttgaaggcgctggagagatatcttccact
gctgcatctacacctaaagatggaaccacaagttccaaagagttagtaaagaatcaaaac
catgaaacttcatctcctaaaaagaagaggaaaagactagaaactgggaaagaagaagaa
gaagacgacgacgatggagaaggagaagaagaagaagaagaagatgaagataataagcaa
gatgggcaacaaaagatgtctcatgtaaacgtggaacgtaatagaagaaagcaaatgaac
gagcatttgaccgttttacgttctcttatgccttgtttctacgtcaagcggggggaccaa
gcatcgattataggtggagttgtggaatacataagcgagctacagcaagttcttcaatcc
ttagaagccaagaaacaacgtaagacctacgcggaagtcctaagcccgagactagtccca
agccctcgtccttcaccaaatgttctaagcccgcgaaaaccgcctcttagccctcgtatc
agccaccatcatctccttctccctcccataagccctcgaacccctctgcccacaagccca
tacggagcccatcctccgcaactaccactcatcccacagcctcctcgttcttactgctta
ggggacccacctccatactccccagcttcatcttcttcttctccttcagtcagtagtaac
catgagagtagtttaataaatgagcttgttgctaactcaaagtcagctttggctgacgtg
gaagtgaagttctcaggagctaatgtgctgctcaaaacggtatcgcataagatcccagga
caggttatgaagataatcgctgctcttcaggatttgtctctcgagattcttcaggttaac
attaacaccgtcgaagaaaccatgctttactctttcaccatcaagattggagttgagtgc
caactaagtgcagaagaattggctcaacaaattcagcaaacattctgctaa
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