Brassica rapa (field mustard): 103847319
Help
Entry
103847319 CDS
T03449
Name
(RefSeq) synaptotagmin-3 isoform X1
KO
K28063
extended synaptotagmin
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103847319
Membrane trafficking [BR:
brp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
103847319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
DUF4064
Motif
Other DBs
NCBI-GeneID:
103847319
NCBI-ProteinID:
XP_009122625
LinkDB
All DBs
Position
A10:19947258..19950339
Genome browser
AA seq
541 aa
AA seq
DB search
MGFFGSVLGILGFAIGIPIGLVVGFFVFVYSQPSHEEYPPARPLVETSITLLLDLLPDIP
LWMKNPDYERVDWFNRFLSYMWPYLDKAICEIIKSSAQPIFADYIGTFCIESIEFETLSL
GSLPPTVHGVKFYETNEKELLFEPSVKWAGNPNIVLVVKLMSLRIKVQLVDLQIFAIMRV
ALKPLLPTFPCFGAVVVSLMEKPHVDFGLKVLGGDLMSIPGLYRYVQETIKRQVSSMYHW
PQVLEIPILDASTASVKKPVGLLHVNIIRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKT
TIKKRNLNPEWNEHFKLIVKDPTSQVLQLEVFDWDKVGGHDRLGMQMIPLKKINPGEKKV
FNLDLIKNSNIVMDVPEKKQRGRLELDLRYVPFRDESLKYRNDVQDEKSSEDDDEFLSNA
GLLSVAIQSAKDVEGKKKYTNPYALVLFRGEKKRTKMLRKTRDPRWNEEFQFTLEEPPLK
ESIRVEVMSKGTGFHFRSKEELGHVDINLDDVVANGRINQKYHLINSRNGVIHVEIRWTT
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggatttttcgggagtgtgctggggatcctcggtttcgcaatcggaatccctatcgga
ctcgtcgttggattcttcgtcttcgtatattctcagccttcacacgaagagtatccacca
gcgaggccactagttgagactagcatcactctccttctcgatcttctccctgatatccca
ctatggatgaagaatcctgactacgaaagagttgactggtttaacaggtttctctcatac
atgtggccctacctcgataaggctatttgcgagattatcaagagctctgcacaacccatt
tttgctgattacattgggactttctgtatagaatctatagagttcgaaacactgagcctt
ggatcgcttccgcccacagttcatggtgttaagttctatgagaccaacgagaaggagctt
ctgtttgaaccatcagtcaagtgggcaggcaatcccaatatagttttggttgtaaagctc
atgtctttacgaatcaaagttcagctcgtagacctccaaattttcgctataatgcgagta
gctctgaagcctcttctaccaaccttcccttgcttcggagccgttgtagtttcattgatg
gaaaagccgcatgttgattttggattaaaagtgcttggtggggatctcatgtccatacca
ggtctctacagatatgttcaggaaactattaaaaggcaagtctcaagcatgtaccactgg
ccacaagttcttgagatacctattcttgatgcttcaacagcttctgtgaagaagcctgta
gggttgcttcatgtgaacatcattagagctcgcaatctcctcaagaaggatttgcttgga
acatctgatccttatgtcaagcttagcttgaccggagagaagcttccggcaaagaaaacc
actatcaagaagaggaacttaaacccggagtggaacgaacacttcaagctcatagtgaag
gatccaacatcacaagtccttcaactagaagtctttgactgggacaaggttggtgggcat
gatagattgggaatgcagatgatccccttgaagaaaattaaccctggggagaagaaggtg
tttaacttggatttgatcaagaattcaaatattgttatggatgtaccagagaagaaacaa
agaggaaggttagagttagacctcaggtatgtgccattcagagatgaaagcctcaagtac
agaaacgatgttcaggatgagaaatcatcagaggacgatgatgagtttctcagcaatgct
ggtctactctcggttgcaatccaatcagccaaagatgtagagggcaagaagaaatataca
aatccttatgctcttgttctcttcagaggagaaaagaaaagaacaaagatgctgaggaag
acaagagatccgagatggaacgaggagttccagttcacactagaagagccgccattgaaa
gagagtatacgcgttgaggtcatgagtaaaggaaccggttttcactttcgttccaaggag
gaactgggacatgtagatataaatctagacgatgttgttgccaatggaaggattaaccag
aagtaccatcttatcaattcaagaaatggtgttattcacgttgagatccgttggaccact
ggttaa
DBGET
integrated database retrieval system
