Brassica rapa (field mustard): 103849745
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Entry
103849745 CDS
T03449
Name
(RefSeq) meiotic recombination protein SPO11-1
KO
K10878
meiotic recombination protein SPO11
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103849745
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
103849745
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
103849745
NCBI-ProteinID:
XP_009124720
UniProt:
M4FE53
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Position
A01:26009938..26018213
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AA seq
426 aa
AA seq
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MSVKGLCVTNNYVTEFSFFIASEVIKRHACSNFKAYNGKHLVPFPLLLANYILSPEKEKN
TKGEMEGNFQISETTNLLRKIKEFTRSIVEDLAEGKSPEISINRFRNYCNDPEADCFCSS
DEPKGREILTLRKRSQTYRIDMLLRVLLIVQQLLQENRHGSKRDIYYMHPSAFKAQSAVD
RAIADICILFQCSRYSLNVVSVGNGLVMGWLKFREAGRKFDCLSSLNTAFPVPVLVEEVE
DIVSLAEYILVVEKETVFQRLANDMFCKTNRCIVVTGRGYPDVSTRRFLRLLMEKLQLPV
HCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPEMKWLGAFPSDSDIYGVPQQCLLPLT
EEDKKRTEAMLLRCYLKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIR
SEGSFH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttaaaggattgtgcgtaacaaacaactacgtcacggagttttcctttttcata
gcgagtgaagtaataaaacggcacgcatgttctaattttaaagcttataacggcaagcac
ttggtacccttcccccttctcctcgccaattacattctcagtcctgaaaaggaaaagaat
acgaagggggagatggagggaaattttcaaatttcagagacgactaatctgcttcgaaag
atcaaagagtttacgcgatcgatcgttgaagatctagccgagggaaaatctccagaaatc
tccatcaatcgattcagaaactactgcaacgatccagaagcagactgtttttgcagctcc
gatgaaccgaaaggtcgggagattctcacgcttaggaagagatcgcaaacctatagaatc
gatatgttgctgagagtattgttgatagttcaacaacttctccaagaaaatagacatgga
tccaaaagagatatctactatatgcatccatcagcattcaaagcacaatcggctgtagac
cgcgcaattgctgatatatgcatcctttttcagtgtagtcgttacagcttgaatgtggtg
tctgttggaaatgggttggtgatggggtggttaaagtttagggaagctggaaggaagttt
gattgtttaagcagcctgaatactgcatttcccgttcctgttcttgtagaggaagtcgaa
gatattgttagtttggcagagtacatactggtggtggaaaaagaaacagtattccagcgt
ttagcaaatgacatgttttgcaagacgaaccgctgcatcgttgtcacaggaagaggctat
cctgatgtttctacaagaaggttcttgcgactcttgatggagaagttgcaactacctgtg
cattgtctagtcgactgtgatccatatggctttgagatcctagccacataccgttttggc
tccatgcaaatggcatatgatatagaatcactacgagcaccagaaatgaaatggttggga
gcttttccttcggactctgacatatacggtgttccccaacagtgtctcttgcccttgaca
gaagaagataagaaaagaactgaagcaatgttgcttagatgctacctgaagcgtgaaatg
ccacaatggaggttggaacttgaaacgatgctgaaaagaggagtgaagtttgagatcgaa
gcactctcagttcactcactctcgtttttatcagaagtttacattccttctaaaatacgt
agtgagggaagtttccattga
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