Brassica rapa (field mustard): 103852045
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Entry
103852045 CDS
T03449
Name
(RefSeq) transcription factor SPEECHLESS isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103852045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103852045
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103852045
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
DUF5427
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
103852045
NCBI-ProteinID:
XP_009127184
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Position
A02:7660938..7670590
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AA seq
365 aa
AA seq
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MQEIISDFLEECEFVDTSLAGDDLFAILESLEGAGEISSTPASTPRDGIASSNELVKDQI
HETSSPKRNKRKRLETDKEEDEEEDGEGEGEGEEDNKQDGEQKMSHVTVERNRRKQMNEH
LTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVRQSLEAKKQRKTYAEVLSPRLVSSP
RPSPPVLSPRKPPLSPRINHLQIHHHLLPPISPRTPQPTSPYRAHPPQLPLIPQPPLRSY
SSLASCSTLGDPPPYSPASSSSSPSVSSNHESSMINELVANSKSALADVEVKFSGANVLL
KTVSHKIPGQVMKIIAALEDLALEILQVNINSVDETMLNSFTIKIGIECQLSAEELAQQV
QQTFC
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagataatatcggattttcttgaagagtgtgaattcgttgacacttcactagcc
ggtgatgatctatttgctatcttagagagtcttgaaggcgccggagagatatcctccacg
cctgcatctacacctagagatggaatcgcaagttcaaacgagttagtaaaggatcaaatc
catgaaacttcatctcctaagaggaataagaggaaaagactagaaaccgacaaagaagag
gacgaagaagaagacggagaaggagaaggggaaggggaggaagataataagcaagatggg
gaacaaaagatgtctcatgtaaccgtggaacgtaacaggagaaagcaaatgaatgagcac
ttgacggttctacgctctcttatgccttgtttctacgtcaaacggggggaccaagcatcg
attataggaggagttgtggaatacataagcgagctacaacaagttcgtcaatctttagaa
gccaagaaacaacgtaagacctacgcggaagtcctaagcccgagactagtctcgagccct
cgtccttcaccgcctgtcctaagcccgcgaaaaccgcctcttagtcctcgcatcaaccac
cttcagatccaccaccacctcctccctcccataagccctcgaacccctcagcccacaagc
ccataccgagcccatccgccgcaactaccactcatcccacagcctcctcttcgttcttac
agctcattggcaagttgtagcaccttaggggatccacctccatactctccagcttcatct
tcttcctctccttcagttagtagtaaccatgagagtagtatgataaatgaactcgttgct
aactcaaagtcggctttggctgacgtggaagttaagttctcaggagctaatgtgctgctt
aaaacggtgtcgcataagatccctggacaggttatgaagataatcgctgctcttgaggat
ttggctctcgagattcttcaggttaatattaactcggtcgacgaaaccatgcttaattct
ttcaccatcaagattggaattgagtgccaactaagtgcagaagaattggctcaacaagtt
cagcaaacattctgctaa
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