Brassica rapa (field mustard): 103857095
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Entry
103857095 CDS
T03449
Name
(RefSeq) transcription factor SPEECHLESS isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103857095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103857095
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103857095
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
RPT
Fibin
FAM176
Cut8
Motif
Other DBs
NCBI-GeneID:
103857095
NCBI-ProteinID:
XP_009132496
UniProt:
A0A397ZXX2
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Position
A03:6507075..6512591
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AA seq
349 aa
AA seq
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MSDFLEECEFVDTSLAEDDLFAILESLEGAGEISPTAASTPKDGATSSKELVTDPNYETP
SPKKKRKRLETEKEDEEEEDGEEEENKQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYV
KRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVPSPRPSPPVLSPRKPP
LSPRISHHHLLLPPISPRTPQPTSPYLAHAPKLPLIPQPPLRSYSSLAGGSSLGDPPPYS
PASSSSSPSVSSIRESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVLKIIA
ALEDLALEILQVNINTADETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttcttgaagagtgtgaatttgtcgacacttcactagccgaagatgatcta
tttgctatcttagagagtcttgaaggcgccggagagatatctccaacggctgcatctaca
cctaaagatggagccacaagttccaaagagttagtaactgatccaaactatgaaactcca
tctcctaagaagaagaggaaaagactagaaaccgagaaagaagatgaagaagaagaagac
ggagaagaagaagagaataagcaacaaaagatgtctcacgtaaccgtggaacgcaacagg
agaaagcaaatgaatgagcacttaaccgttttacgttctcttatgccttgtttctacgtc
aaaaggggggaccaagcatcgataattggaggagttgtggaatacattagcgagctacaa
caagttcttcaatctttagaagccaagaaacaacgtaaaacatacgcagaagttcttagc
ccgagactagtcccgagtcctcgcccttcaccacctgtcctaagcccgcgaaaaccacct
cttagcccgcgtatcagccaccatcatctccttctccctcctataagccctcgaacccct
cagcctacaagcccatacctggcccatgctccgaaactacccctcatcccacagcctcct
cttcgttcttatagctcattggccggtggtagcagcttaggggacccacctccatactct
ccagcttcatcttcttcctctccttcagttagtagtatccgtgagagtagtgtgataaat
gagctcgtcgctaactctaagtcggctttggctgacgtggaagtgaagttctcaggagct
aatgtgctgctcaaaacggtgtcgcataagatccctggacaggttttgaaaataatcgct
gctcttgaggatttggctctcgagattcttcaggttaatattaacaccgccgacgaaacc
atgcttaattctttcaccatcaagattggaattgagtgccaactaagtgccgaagaactg
gctcaacaaattcagcaaacattctgctag
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