KEGG   Brassica rapa (field mustard): 103857945
Entry
103857945         CDS       T03449                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103857945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103857945
Spliceosome [BR:brp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    103857945
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    103857945
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 103857945
NCBI-ProteinID: XP_009133447
UniProt: M4C7M0
LinkDB
Position
A03:complement(10307057..10309385)
AA seq 352 aa
MANRTDPLAKNIRGTNPQNLVEKIVRTKIYNHTFWKEQCFGLTAETLVDKAMELDHVGGT
FGGNRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGSDVDVYRYL
EPLYNDYRKVRQKLSDGRFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR
KSVLEDDFEEEEEKEENEGMADGSEDEKDHHRRSPERERDRDRDRDRRRDSHRHRDRDYD
RDYDMDRDYDRDYERERGRGRDRDRERDRDRDHYRDRDRERERGRDRERERARRRSRSRS
RDRKRHESDEREEPKKKKEKKEKMKEDGTDHPDPEIAEANRLRASLGLKPLK
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcgaaccggacggatccgttggcgaagaacataagagggacgaaccctcagaatctg
gtggagaagatcgtgcggacgaaaatctacaatcacactttctggaaggagcagtgcttc
ggcctcacggcggagactcttgtagataaggctatggagctcgaccacgttggcgggacc
ttcggtggtaaccgcaagcccactcctttcctttgcctgatactgaagatgctgcagatc
cagcctgagaaagagatcgtcgtggagttcatcaagaacgatgattacaagtatgttcgt
attctaggtgcgttttatctacgtctcactgggtctgatgttgatgtctatcgctacctc
gagcctctctacaatgactaccgtaaagtgaggcagaagctatctgatgggaggttttcg
ttgacacatgtggacgaagtcattgaggagcttttaaccaaggattattcgtgtgatatc
gcaatgccacgcttgaagaaaaggtggacgcttgaacagaatggtttgttagagccgagg
aagagtgttttggaagacgactttgaagaagaagaggaaaaagaggagaatgaagggatg
gctgacggatctgaagacgagaaggatcatcaccgtaggagtcctgaaagagaaagagat
agggacagagacagggacaggagacgtgacagtcataggcacagggaccgtgattatgat
agagactatgacatggaccgagactacgacagagactatgaaagggaacgtgggcgtggt
cgagacagggatagggagagagacagagacagagatcactatagggaccgagacagggaa
agggaacgaggcagggacagagaaagagagagggcaaggcggagaagtagaagcaggagt
agggatcgtaagagacatgagagtgatgagagggaggaacctaagaagaagaaggagaag
aaagagaagatgaaggaagatggaacagatcatccggatcctgagattgcagaagctaat
agactcagagcatctctgggactgaaaccattgaaataa

DBGET integrated database retrieval system