Brassica rapa (field mustard): 103857945
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Entry
103857945 CDS
T03449
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103857945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103857945
Spliceosome [BR:
brp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103857945
Complex C
U4/U6.U5 tri-SnRNP related factors
103857945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
103857945
NCBI-ProteinID:
XP_009133447
UniProt:
M4C7M0
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All DBs
Position
A03:complement(10307057..10309385)
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AA seq
352 aa
AA seq
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MANRTDPLAKNIRGTNPQNLVEKIVRTKIYNHTFWKEQCFGLTAETLVDKAMELDHVGGT
FGGNRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGSDVDVYRYL
EPLYNDYRKVRQKLSDGRFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR
KSVLEDDFEEEEEKEENEGMADGSEDEKDHHRRSPERERDRDRDRDRRRDSHRHRDRDYD
RDYDMDRDYDRDYERERGRGRDRDRERDRDRDHYRDRDRERERGRDRERERARRRSRSRS
RDRKRHESDEREEPKKKKEKKEKMKEDGTDHPDPEIAEANRLRASLGLKPLK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggatccgttggcgaagaacataagagggacgaaccctcagaatctg
gtggagaagatcgtgcggacgaaaatctacaatcacactttctggaaggagcagtgcttc
ggcctcacggcggagactcttgtagataaggctatggagctcgaccacgttggcgggacc
ttcggtggtaaccgcaagcccactcctttcctttgcctgatactgaagatgctgcagatc
cagcctgagaaagagatcgtcgtggagttcatcaagaacgatgattacaagtatgttcgt
attctaggtgcgttttatctacgtctcactgggtctgatgttgatgtctatcgctacctc
gagcctctctacaatgactaccgtaaagtgaggcagaagctatctgatgggaggttttcg
ttgacacatgtggacgaagtcattgaggagcttttaaccaaggattattcgtgtgatatc
gcaatgccacgcttgaagaaaaggtggacgcttgaacagaatggtttgttagagccgagg
aagagtgttttggaagacgactttgaagaagaagaggaaaaagaggagaatgaagggatg
gctgacggatctgaagacgagaaggatcatcaccgtaggagtcctgaaagagaaagagat
agggacagagacagggacaggagacgtgacagtcataggcacagggaccgtgattatgat
agagactatgacatggaccgagactacgacagagactatgaaagggaacgtgggcgtggt
cgagacagggatagggagagagacagagacagagatcactatagggaccgagacagggaa
agggaacgaggcagggacagagaaagagagagggcaaggcggagaagtagaagcaggagt
agggatcgtaagagacatgagagtgatgagagggaggaacctaagaagaagaaggagaag
aaagagaagatgaaggaagatggaacagatcatccggatcctgagattgcagaagctaat
agactcagagcatctctgggactgaaaccattgaaataa
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