Brassica rapa (field mustard): 103859911
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Entry
103859911 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00730
Thiamine metabolism
brp00900
Terpenoid backbone biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
103859911
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103859911
Enzymes [BR:
brp01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
103859911
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-GeneID:
103859911
NCBI-ProteinID:
XP_009135754
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All DBs
Position
A03:complement(19756491..19762878)
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AA seq
717 aa
AA seq
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MALSVFRFPSYLSRETSTDHCKTTSLSSFKSLATYLPSICHRSTVSRSKISTTVNGSLVK
RGDYYSTRPPTPLLDTINHPIHMKNLSIKELKALSDELRSDVIFNVSKTGGHLGSNLGVV
ELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMKTLRQTNGLSGFTQRGESEHDS
FGTGHSSTTISAGLGMAVGRDLKGRDNNVVAVIGDGAMTAGQAYEAMNNAGYLESDMIVI
LNDNKQVSLPTANLDGPTPPVGALSRALSNKLQSKRPLRELREAAKGMTKKIGGSMHRLA
SKVDEYARGMISGAGSTLFEELGFYYIGPVDGHNLDDLVSILKEVKSTRTSGPVLIHVVT
EKGHGYPYAERADDKYHGVVKFDPATGKEFKNIAETKSYTTYFAEALIAEAEEDKDVVAI
HAAMGGGTGLNLFQRRFSTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ
VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVA
TAAAIDDRPSCFRYPRGNGVGVSLPPGNKGVPLEVGKGRILRDGERVALLGYGSAVQNCL
EASSVLDKRGLKITVADARFCKPLDIALIRKLAKSHEVLITVEEGSIGGFGSHVVQFLAL
DGLLDGKLKWRPMVLPDRYIEHGSPLDQLAEAGLTASHIAATVLNLIGTPRETLYWK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctctctctgtatttcgatttccttcttacttgagtagagaaacttcaacagatcac
tgcaaaactacttccttatcttcttttaaatctttggctacatatcttccatcaatatgc
cacagaagtaccgtttctcgttcaaaaatcagtacaacagtaaatggctcacttgtaaag
aggggtgactattattctactagaccaccaactcctttgttggacacaatcaatcatcca
atccacatgaaaaatttgtccatcaaggaactcaaagctctttcagacgagctgaggtca
gatgttatcttcaatgtttcaaaaactggaggacatttaggttccaatcttggtgttgtt
gagctcacagtggctcttcattacattttcaatactcctcaagataagattctttgggat
gttggtcatcagtcttatcctcacaagattctaacggggagaagaggtaagatgaagaca
ctgagacaaaccaatggcttatccggtttcacccagcgaggagagagtgaacatgattcc
tttggcactggacatagttcaaccacaatatctgcaggattggggatggctgtgggaagg
gacttgaagggtagggacaacaacgtggttgcagttataggcgatggtgcaatgacagct
ggacaagcttatgaagcaatgaacaatgctggctatttggagtctgacatgattgtgatt
ctcaatgacaacaagcaagtctctttgcctactgctaacttggatggaccaacaccacct
gttggagctttgagcagggctcttagtaataagttgcagtctaaacgtcctcttagagaa
cttagagaagctgcaaaggggatgacaaagaaaattggaggatcaatgcaccggctagct
tcgaaggtagatgagtatgctcgtggaatgattagtggggctggttcaactctatttgaa
gaacttggtttctattatattggtccagttgatggacacaacctagatgatttggtttca
attcttaaagaagtaaagagcactcgaacctcaggaccagttcttattcatgttgtgact
gagaaaggtcatggatatccttatgcagagagagcagatgacaagtatcacggagttgtg
aaatttgatccagcaactggtaaagagttcaaaaacattgctgaaactaagtcttacacc
acctattttgcggaggccttgattgcagaagcagaggaagataaagatgttgttgccatt
catgcagccatgggaggtgggactgggttgaatctcttccaacgccgattctctacacgt
tgtttcgatgtcggtatagcagaacaacatgcagttactttcgctgctggtcttgcatgt
gaaggtcttaagccattttgtgcaatctactcgtctttcatgcaacgagcttatgaccaa
gttgtacatgatgttgatctacaaaaactgcctgtgagatttgcaatggatagagcagga
cttgtgggagcagatggtccaacgcattgtggtgcatttgatgtgacgtttatggcatgt
cttccaaacatgatagtgatggctccatctgatgaagcagagctttttaacatggttgca
accgctgcagctatagatgaccgtccttcttgctttcgatatcctagaggaaacggtgtt
ggcgtttcacttcctcctggaaacaaaggtgtccctcttgaggttggaaaaggtaggata
ctaagggatggtgagagggtagctctattaggctacggatcagctgttcaaaactgttta
gaggcttcttctgtactcgataaacgaggattaaagataactgtagcagatgcaagattt
tgcaagccattagatattgctcttattcgaaagttagctaaatctcatgaggttctgatc
actgttgaagaaggttcaattggagggtttggatcacatgtggtacagtttctagcacta
gatggtcttcttgacggaaagctcaagtggagaccaatggtactacctgaccggtatatc
gagcatggatcaccactagaccaactggctgaagctggcctcacggcttctcatattgca
gccaccgtacttaacttaattgggacacccagagaaaccttgtattggaagtaa
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