Brassica rapa (field mustard): 103860788
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Entry
103860788 CDS
T03449
Name
(RefSeq) 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00730
Thiamine metabolism
brp00900
Terpenoid backbone biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
103860788
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103860788
Enzymes [BR:
brp01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
103860788
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
103860788
NCBI-ProteinID:
NP_001288863
UniProt:
Q1PCC5
LinkDB
All DBs
Position
A03:23451276..23454457
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AA seq
716 aa
AA seq
DB search
MALSAFAFPSYITTKGGLTDSCCKSNSLSSSRSLSADLPSPCLRPNTSHSNRKAKVNASL
AEKGEYYSNRPPTPLLDTINYPIHMKNLSTKELKQLSDELRSDVIFNVSKTGGHLGSSLG
VVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEH
DCFGTGHSSTTISAGLRMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI
VILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGVTKQIGGPMHQL
AAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSARTTGPVLIHVI
TEKGRGYPYAERADDKYHGVVKFDPATGKQFKTTNKTQSYTTYFAEALVAEAEVDKDVVA
IHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD
QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNIV
ATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEVGKGRILKEGERVALLGYGSAVQSC
LGAAVMLQERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA
LDGLLDGKLKWRPMVLPDRYIDHGSPADQMAEAGLMPSHIAATALNLIGAPREALY
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctctatctgcatttgcttttccttcttacataacaaccaaaggaggtttaacagat
tcttgttgtaaatcaaattctctgtcttcttctcgatctttgtctgcagatcttccatca
ccatgtctgaggccaaacaccagtcattcaaacagaaaggcaaaagtgaatgcttcactt
gcagagaagggtgaatactattcaaacagaccaccaactccattacttgacacaatcaat
tacccaattcacatgaaaaatctttccaccaaggagctgaaacaactctctgatgagctg
agatcagatgtgatcttcaacgtctccaaaacaggtggacatttggggtcaagcctcggt
gttgtggagctcacagtggctcttcactacattttcaacactccacaggacaagattctt
tgggatgttggccatcagtcttatcctcacaagattctcaccgggagaagaggcaagatg
ccgacgatgaggcaaaccaatggtctctccggtttcactaagcgaggagagagcgagcat
gattgctttggtacaggacatagctcaaccacaatatctgctggcttaagaatggcggta
ggaagggatttgaaagggaagaacaacaatgtggttgctgtgattggtgacggtgccatg
acggcagggcaggcttatgaagccatgaacaacgctggttatctagactctgatatgatt
gtcattcttaacgacaacaagcaagtctcattacctactgccactttggatggtccgagt
ccgcccgttggcgcattgagcagcgctcttagtcggttacagtcaaacccagctcttaga
gagttgagagaagtcgcaaagggtgtgacaaagcaaataggtgggccaatgcatcagtta
gctgctaaggtggatgaatacgctagaggaatgataagcggaactggatcaacgctgttt
gaagaactcggtctctactatattggtccagttgatggacacaacatagatgatttggta
gccattcttaaagaagttaagagcgcaagaaccacaggaccggttcttatccatgtcata
actgagaaaggtcgtggttatccttacgctgagagagctgatgacaaataccatggtgtt
gtgaaatttgatccagcgactggtaaacagttcaaaactactaacaagactcagtcttac
acaacctactttgcggaggcgttagtggcggaagcagaggtagacaaagacgtggttgcg
attcatgcagccatgggaggtgggacagggttgaatctcttccaacgtcgcttcccgaca
agatgtttcgatgtcgggatagcggaacagcatgcagttacttttgctgctggtttagcg
tgtgaaggccttaagcccttttgcgcaatctattcttctttcatgcagcgtgcttatgac
caggttgtacatgatgtggacttgcagaagttgccggtgagatttgcgatggatagagct
ggactagtgggagctgatggtccaacacattgtggagcgtttgatgtgacgtttatggct
tgtcttcctaacatgatagtgatggctccatctgatgaagctgagctttttaacattgtt
gcaaccgctgctgctattgatgaccgtccttcttgtttccgttaccctagaggtaacggt
attggcgttgcgttgcctcccggaaacaaaggtgttcctgttgaggttggaaaaggtagg
atcttaaaagaaggagagagggttgcgttgttggggtatggctcagcggttcagagctgt
ttaggagcggctgtaatgctccaagaacgtggattaaacgtcaccgtggcagatgcgcgg
ttctgcaagccgttggaccgtgctctcattcgcagcttagctaagtctcacgaggtgctg
atcacggttgaagaagggtccatcggagggtttggatcgcatgtggttcagtttcttgca
ttggatggtcttctcgatgggaagctcaagtggagaccaatggtattgcctgataggtac
atcgaccatggttcaccagctgatcaaatggctgaagctggacttatgccgtctcatata
gcagcaactgcacttaacttaatcggagcaccgagggaagctctgtattga
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