Brassica rapa (field mustard): 103863558
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Entry
103863558 CDS
T03449
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103863558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103863558
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103863558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
AIM3_BBC1_C
Motif
Other DBs
NCBI-GeneID:
103863558
NCBI-ProteinID:
XP_009139544
UniProt:
M4EVD3
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All DBs
Position
A04:complement(5518726..5523659)
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AA seq
772 aa
AA seq
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MAEMDPEGMDGVRMTWNVWPRTKVEASKCVIPLAASISPIRRHSDIPSLPYAPLKCRTCV
SVLNAFARVDFAAKIWICPFCFQRNPFPPHYHMISDTNLPGELYPQYSTVEYALPSTAGQ
FDPRTGAAPPLTPPPVFVFVLDTCMIEEELGFAKSALKQAIGLLPENALVGFVSFGTQAH
VHELGFSEMSKVFVFKGNKEVSKDQVLDQLGLSSRRAPTSGFPKGAQNGLQSAAGVNRFL
LPASDCEYTLDLLLDELQTDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALV
GGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYESIAKQLVAQGHVLDLFAS
ALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCS
KDIKIQGAIGPCSSLEKKGPSVADTVIGEGNTNAWKLCGLDKSTCLTVFFDLSSTGSNAP
GTVNPQFYLQFVTSYQNPEGQTLLRVTTITRQWVDTAVSTEELVQGFDQETAAVVMARLA
SFKMETEEGFDATRWLDRTLIRLCSKFGDYRKDDPTSFTLNPYFSLFPQFMFNLRRSQFV
QVFNNSPDETAYFRMLLNRENISNATVMIQPSLTSYTFSSPPQPALLDVASIAADRILLL
DAYFSVVVFHGMTIAQWRNMGYHEQPEHEAFAQLLQAPQEDSQMIVRERFPVPRLVVCDQ
HGSQARFLLAKLNPSATYNSANEMSAGSDVIFTDDVSLQVFFEHLQKLAVQS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatggatcccgaaggcatggacggagttcgcatgacctggaacgtgtggcct
cgcaccaaggtcgaagccagcaagtgcgtgatcccactcgccgcctccatctccccgatc
cgtcgccactccgacatcccttctctcccttacgctcccctcaaatgccgaacctgcgtc
tccgtcctcaacgccttcgcccgcgtcgatttcgccgccaagatctggatctgccctttc
tgcttccagcgcaaccctttccctcctcactaccacatgatctccgacaccaatctcccc
ggcgagctttaccctcagtactccaccgttgagtacgcgcttccttccaccgccggccag
ttcgatcccagaaccggcgctgctccgcctctgacgcctcctcctgtgttcgtgtttgtt
ctcgacacgtgtatgatcgaggaggagttggggttcgctaaatctgcgcttaagcaggcg
atcgggttgcttccggagaatgctttggtggggtttgtgtcttttggcactcaggctcat
gtccatgagttggggttctcggagatgtctaaagtctttgtctttaaagggaacaaagaa
gtctccaaggatcaggttttggatcagttggggctttcctcgaggagagctcccacttct
gggtttcctaaaggagcccaaaatgggttacagagtgctgctggtgtcaacaggttcttg
ctgcctgcctcggattgtgaatacactctggacttgcttttggatgagctgcaaacagac
cagtggcctgttcagccaggtcatcgtccccaacgatgcactggtgtggcgttgagtgtt
gctgctggattgcttggagcttgcttgcctggaaccggggcaagaatcgttgctttggtc
ggaggtccatgtactgagggccctggaacgattatctcaaaagatttgtcagatcctgtg
cggtctcacaaagatctagataaagatgctgccccttactataagaaagctgtcaagttt
tatgagagtattgcaaagcagctggtcgctcagggtcatgtgttagaccttttcgcttcc
gcactcgatcaggttggggttgctgaaatgaaagttgcagttgaaagtaccggtggcctt
gttgttctatctgaaagttttgggcattccgtttttaaagattccttcaaacgggtgttt
gaagatggcgagcagtctcttggcctctgctttaatggcacgcttgagatcaattgctca
aaagatatcaaaattcaaggggctatcgggccttgctcatcattagaaaagaaaggtccc
agtgttgccgacacagtcattggagaggggaataccaatgcttggaagttatgtggcctc
gacaagagtacttgcttgactgtattctttgatctatcctcaaccgggtcaaatgctcct
ggaactgtaaatcctcagttttatttgcagtttgttacaagttaccaaaaccctgaaggt
caaacattgcttagggttacaacaataaccagacagtgggtagatactgctgtgagcaca
gaggaacttgtgcaaggctttgatcaagaaactgctgctgttgtcatggcaagattagct
tcctttaaaatggaaacagaggagggatttgatgctactcgatggctagatcggactctc
attcgtctgtgctcaaaattcggtgactatagaaaggatgacccaacctcatttacgctg
aatccatatttttcattgttccctcaattcatgtttaacctgcggaggtcacagtttgtc
caggtctttaacaatagtccagatgaaactgcatacttccgcatgttactaaaccgggag
aatatttcaaatgctacggtcatgatccaaccatcgctgacatcatatacattcagttca
ccacctcagccagctttgctggatgtggcttccattgcagccgacagaattcttctgtta
gatgcatattttagtgttgttgtcttccatggaatgactatagcacagtggcgaaacatg
ggttatcatgagcagcctgaacatgaggcctttgctcagctattgcaagctccccaagag
gattcccagatgatagtccgggagcgtttccctgtcccgagattagttgtgtgtgatcaa
catggatctcaggcaaggtttttattggcaaagctgaatccatcagcgacttataacagt
gcaaacgagatgtcagctgggtctgatgtaatcttcactgacgacgtgagcctgcaagtc
ttttttgagcatctccagaaactggccgtgcaatcctga
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