Brassica rapa (field mustard): 103863605
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Entry
103863605 CDS
T03449
Name
(RefSeq) probable pectate lyase 15
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103863605
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103863605
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Methyltransf_9
XFP
Motif
Other DBs
NCBI-GeneID:
103863605
NCBI-ProteinID:
XP_009139602
UniProt:
M4EV97
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All DBs
Position
A04:complement(5905811..5909649)
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AA seq
451 aa
AA seq
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MASSSQKVTSVCLTVLVLLALSATILRKIEIPSSRKVKTEELQSSKNTSTMAANRLEGVE
LNEQHAVDDPDKVADEVSTLVQMSEHNITARRKLGFFSCGTGNPIDDCWRCDRNWHKNRK
RLADCGIGFGRNAVGGRDGRFYVVTDPTDEDVINPKPGTLRHAVIQDEPLWIVFKRDMVI
ELKQELIMNSFKTIDGRGANVHIANGACITLQFITNVIIHGVHIHDCKPTGNAMVRSSPS
HFGWRTMADGDAVSIFQSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVML
LGHSDSYTIDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPT
INSQGNRYAAPKNPFAKEVTKRVETDASEWQKWNWRSEGDLLLNGAFFKASGAEASASYG
RASSLAAKPSSMVHTITSTAGALGCRRGRPC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgtctcagaaagtgacctctgtttgtttgaccgtcctcgtcctcttagct
ctcagtgcaacgattctccggaaaattgaaatccctagctccaggaaggtgaaaacagag
gagttgcagagctcaaaaaacacctcaacaatggcggcgaacaggcttgaaggtgtggag
ttgaatgaacagcacgcggttgatgatccagataaagttgctgatgaagtctctaccctt
gttcagatgagcgaacataacatcacagcaaggaggaagcttggatttttctcatgtgga
accggtaacccgatcgatgactgttggcgttgtgaccgtaactggcataagaaccgcaaa
cgcctggccgattgtgggatcggttttggacgcaacgctgttggtggtcgtgatggacgc
ttctacgttgtcactgaccccactgatgaagacgttattaaccccaaaccaggaactctt
cgccacgcggttatccaagatgagcctctatggattgtgttcaagagagatatggtgata
gagctgaaacaagagctgattatgaacagtttcaagaccattgatggtcgtggtgctaat
gtccatatagctaacggtgcttgcatcaccctccagtttatcaccaacgtcatcatccat
ggtgttcacattcatgattgcaagcctactggaaacgccatggttagaagctcgccatct
cattttggctggaggacaatggctgatggtgatgcagtctctatctttcagtcatctcat
atctggattgatcataactctctctctcactgtgctgatggccttgtggatgctgtcatg
ggttctactgctattaccgtttccaataatcactttacacaccacaatgaggtcatgttg
ctcggccacagtgattcctacacaatagacaagctgatgcaagtgaccattgcttacaac
cattttggagaaggattggttcagagaatgccaaggtgcagacatgggtatttccatgtg
gtcaacaacgactacacacactgggagatgtacgcaattggtgggagtgcagatccaacc
ataaacagtcaaggaaacagatatgctgctcctaagaaccctttcgccaaagaggtgacg
aaaagagtagagacagatgcaagtgaatggcagaagtggaattggagatcagaaggagat
ctgctactgaatggagcattcttcaaggcatcaggagcagaagcctcagctagctatgga
cgagcctcaagcttagcagctaaaccatcatcaatggtccacaccataacctctactgca
ggagcactaggttgccgcagaggcagaccttgttag
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