Brassica rapa (field mustard): 103864120
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Entry
103864120 CDS
T03449
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103864120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103864120
03036 Chromosome and associated proteins [BR:
brp03036
]
103864120
Spliceosome [BR:
brp03041
]
Complex B
Other components
Prp19-related factors
103864120
Complex C
103864120
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103864120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_CcmH_CycH
TPR_2
TPR_17
HAT_Syf1_M
ARM_TT21
Trnau1ap
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
103864120
NCBI-ProteinID:
XP_009140122
UniProt:
A0A397ZKV5
M4E9K6
LinkDB
All DBs
Position
A04:11183552..11186942
Genome browser
AA seq
706 aa
AA seq
DB search
MASGKDSDRTLGYMTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPK
QKITDSTELSDYRLRRRKEFEDKIRRARWNIQVWMKYAQWEESQKDYARARSVWERAIEG
DYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQ
IFERWMQWSPDQQGWLSFIKFELRYNEIERARSIYERFVLCHPKVSAYIRFAKFEMKGGE
VARARHVYERATEKLADDEEAETLFVAFAEFEERCKEPERARFIYKFALDHIPKGRAEDL
YKKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYVRLEETVGNKDRIR
EIYERAIANIPPAEEKRYWQRYIYLWINYALYEEIETEDVERTRDVYRECLKLIPHSKFS
FAKIWLLAAQFEIRQLNLAGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYER
YLEWSPENCYAWSKYAELERSLAETERARAIFELAISQPALDMPELLWKAYIDFEIAEGE
LERTRALYERLLDRTKHYKVWVSFAKFEASSAEQEEDEEEEPQEEIDATERKKECIRRAR
EIFERANSYYKDSAPELKEERATLLEDWLNMETNFGNLGDVSVVQSKLPKKLKKRKPITR
EDGSTEYEEYIDYLYPEESQTTNLKILEAAYKWKKQKLASSEEDYD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcaaagattccgatcgtaccttagggtacatgacccggaaagacaccgaa
gtcaagctcccacgccccacccgggtcaagaacaagactcccgccccggttcaaatcacc
gcggagcagatcctaagggaagctcgagagcgtcaagaggccgagatccgccctcccaag
cagaaaatcaccgactccaccgagctctccgactaccgcctccgccgccgcaaggagttc
gaggacaagatccgccgcgcgagatggaacatccaggtctggatgaagtacgcccagtgg
gaggagtcccagaaggactacgcgcgcgctcggagcgtgtgggaacgcgccatcgagggc
gattacaggaaccacacgctgtggctcaagtacgccgagttcgagatgaagaacaagttc
gtcaacagcgcgagaaacgtctgggaccgagccgtcacgctcctcccgcgcgtggaccag
ctctggtacaagtacatccacatggaggagattctcggcaacatcgccggagctaggcag
atattcgagcggtggatgcagtggtctcccgatcagcaaggatggctctcgttcatcaag
ttcgagcttaggtataacgaaatcgaacgcgctagatcgatctacgagaggttcgtgctt
tgtcatccgaaggtttctgcttatattcgattcgctaagtttgagatgaagggaggtgaa
gtcgcacgcgcgaggcacgtgtacgaacgcgccacggagaagcttgcggatgatgaggag
gccgagacgctctttgtggcgtttgctgagtttgaggagcggtgcaaggagccggagcgt
gctaggtttatctacaagtttgcgcttgatcatattcctaaagggagagctgaggatttg
tataagaagtttgtggcgtttgagaaacagtatggtgatagggaagggattgaggatgct
attgttgggaagaggaggtttcagtatgaggatgaagtgaggaagaaccctttgaactat
gattcttggtttgattacgttaggctggaggaaactgtggggaataaggataggattaga
gagatctatgagagggctattgctaatattccacctgctgaagagaaacgttactggcaa
agatacatctacctctggattaactatgcattgtatgaagagattgaaactgaagatgtg
gagcgtacgcgagatgtatacagagaatgcctcaagcttatcccccactccaaattttcc
tttgccaaaatatggttgctcgctgctcagtttgaaatccggcaactgaatctcgctggt
gctcggcagatattaggaaacgctattggaaaagctccaaaagataagatatttaagaaa
tacattgagattgagctccaactgggaaacatagataggtgtagaaagctctatgagcgt
taccttgagtggtctccagagaattgctatgcttggagcaaatatgctgagctagaaagg
tctcttgctgagactgaacgagctagagctatctttgagctggcaatatctcagccagct
cttgacatgcccgaactgctatggaaggcatacatagattttgagatagctgaaggagaa
ttagagaggacacgagctttatatgagcgactcttggaccgcacaaagcattacaaggtg
tgggttagttttgcaaagtttgaagcttcttctgcagaacaagaagaagacgaggaagag
gaaccccaagaagaaatagatgctactgaacgcaagaaagaatgcatcagacgcgccaga
gagattttcgagagagccaacagctactacaaagactctgcaccagagttgaaagaagaa
agagctacactcttagaggattggcttaacatggagacaaactttggcaatctcggggat
gtgagtgttgtacaatctaagctcccgaagaagctcaagaaaagaaaaccaatcacaaga
gaagatggctctacagagtatgaagaatacattgattatctatacccagaagaatcacag
acaacaaatcttaagattcttgaagctgcttacaagtggaagaagcagaagcttgcatct
tctgaggaggattacgattaa
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