Brassica rapa (field mustard): 103870482
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Entry
103870482 CDS
T03449
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00906
Carotenoid biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M01040
Lutein biosynthesis, plants, lycopene => lutein
brp_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
103870482
Enzymes [BR:
brp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
103870482
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
Trp_halogenase
NAD_binding_8
Pyr_redox_3
GIDA
HI0933_like
FAD_binding_3
FAD_binding_2
Pyr_redox
XdhC_C
Motif
Other DBs
NCBI-GeneID:
103870482
NCBI-ProteinID:
XP_009146860
UniProt:
M4EM05
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Position
A05:25420103..25422008
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AA seq
493 aa
AA seq
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MDTLLRTPNKLEFFIPQFHGFERLSPNPSRVKLGVKKRAIRIGSSITSASSALLDLVPET
KKENLDLDLPLYDTSLNKTVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNY
GVWVDEFEAMDLLDCLDTTWSGAVVYINDGAEKDLSRPYGRVNRKQLKSKMLQKCITNGV
RFHQAKVTDVVHEEVNSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGIV
AEVDGHPFDVDKMVFMDWRDKHLDAYPEVKERNSKIPTFLYAMPFSSNRIFLEETSLVAR
PGLKMEDIQERMVARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPS
TGYMVARTLAAAPIVANAIVRYLGSTKGDELSAEVWRDLWPIERRRQREFFCFGMDILLK
LDLDATRRFFDAFFDLEPRYWHGFLSSRLFLPDLVFFGLSLFSHASNTSRLEIMTKGTVP
LAKMINNLVKDRD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatactctcttgagaacacccaacaagctcgagtttttcatccctcagtttcatggg
ttcgagagattaagtccaaatccttcaagggtcaagcttggtgttaaaaaaagagcaatc
agaatcggtagtagtatcactagtgctagcagtgctcttttggatcttgttcctgaaacc
aagaaggagaatctcgacttggaccttcctttatacgacacttccctgaacaaaactgtt
gatctagctatcgttggcggcggccctgccggtttagccgtggctcagcaagtctcagaa
gctggactctctgtatgctccatcgacccttcccccaaactcatttggcctaacaactat
ggagtttgggttgacgagttcgaagccatggacttgctagactgcctagacaccacctgg
tccggcgccgtcgtctacatcaacgacggcgccgagaaggacctatcccggccttacggg
agagtcaaccgtaaacagctcaaatccaagatgcttcagaagtgcatcaccaacggtgtt
aggttccatcaggctaaggtgaccgacgtggttcacgaggaggtgaactccactgttgtc
tgcagtgacggtgtgaagattcaggcttctgttgttctcgacgctactggtttttcaaga
tgcttggtgcagtacgacaagccgtataacccgggctatcaagtagcttatggtatcgtt
gctgaggtcgatggccacccgtttgatgtggataagatggtgtttatggactggagagat
aagcatcttgacgcgtaccctgaggttaaagaacggaacagcaagatccctacgttcttg
tacgcgatgccgttttcttccaacagaatctttcttgaggagacgtctcttgtcgctagg
ccgggtttgaagatggaagatatccaagagaggatggttgcgaggctgaaacatttgggg
atcaatgtgaagcgtattgaggaagatgagcgttgtgtgatccctatgggaggtccttta
cctgtcttgcctcaaagagttgttggcattggcggtacggcggggatggttcatccttct
acaggttacatggtggctaggactcttgcagctgctccgatagttgcaaacgctatagtg
aggtaccttggttctactaaaggagatgagctctcagctgaggtgtggagagacttgtgg
cctattgagaggaggagacagagggagttcttctgttttgggatggatatattgctgaag
cttgatttggatgctactaggaggttctttgatgcgttctttgacctggaaccgcgttac
tggcatggcttcttgtcgtcgaggctgtttctcccggacttggtgttcttcgggttgtcg
ctcttctcgcatgcttctaatacctcgaggttggagatcatgactaagggaactgttcct
cttgctaagatgatcaacaatttggttaaagatagagactaa
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