Brassica rapa (field mustard): 103874595
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Entry
103874595 CDS
T03449
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103874595
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103874595
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103874595
03036 Chromosome and associated proteins [BR:
brp03036
]
103874595
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103874595
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103874595
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103874595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
103874595
NCBI-ProteinID:
XP_009151268
UniProt:
A0A397Z1Z3
LinkDB
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Position
A06:23466052..23469862
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AA seq
538 aa
AA seq
DB search
MLDAVAPGDMASLDADLLQLQEMSTFVLKSRPEFTQKLFDQWLSLPEAHRQVASLLQDAV
AGAPLNVPGSASGSGPGTSNSLPSMFPAGSAPPLSPRSCGSPRTMKQRAPSNLGSPLKVL
NEPVKESIPQFYFQNGRPPPSEIKEQCMFRVNHFFYGHTDGLQIQEFKLVTREICKLPSF
FSTSLFRKIDVNNTGFVTREAFIDYWVNGNMLIMDKTTQIFKILKQQNQNFLVKDDFKPL
LKELLATHPGLEFLQGTPEFQERYAETVTYRIFYYINRSGNGRLTFRELKRGNLIDAMLH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMKYGNHALTYRIVDRIFS
QVARKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGILTRNEMQFFYE
EQLHRMECMAQEAVLFEDILCQLIDMIGPEDESYITLNDLKGSKLSGNVFNILFNLNKFM
AFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgcggttgctcccggagacatggcttccctcgacgccgatttgctccagctc
caggagatgtccacgttcgtcctcaaatcgagacccgaattcactcagaagctcttcgat
cagtggctttctctccccgaagctcaccgtcaggttgcatcgttgcttcaagatgcagta
gctggagctcctttgaatgttcctgggagtgcatctggttcaggtcctggtaccagcaac
tcgttaccgtccatgtttcctgcggggagtgctcctccgctttcaccaagaagctgcggt
tcgcctcgtacgatgaaacagagggccccttctaatttaggatctccgttgaaagttctc
aacgagcctgttaaggagtcgattcctcagttttattttcaaaatggtcgcccacctcca
agcgagataaaagagcaatgtatgtttagagtcaaccactttttctacggccacacggat
ggactgcaaatacaagaattcaaactagtcacccgtgagatctgcaagcttccatctttc
ttctccacgtcactttttaggaagatcgatgtcaataacacaggttttgttaccagggaa
gcatttattgattattgggtaaacgggaacatgttgataatggataaaactacccaaata
ttcaagatactaaagcagcaaaatcagaatttccttgtgaaggatgactttaagccacta
cttaaagaacttttggcgacacatcctgggcttgaatttttgcaaggcacacctgaattc
caagaaagatatgctgaaactgttacatacagaatattttactacataaatagatctgga
aacggtcgacttacatttagggagcttaaacgtggaaatttaatcgatgctatgcttcat
gctgatgaagaagaagatatcaacaaagtgttacggtatttctcatacgagcatttctat
gtcatatactgcaagttctgggagctcgatactgaccacgatttcctgattgacaaagaa
aaccttatgaaatatggcaaccatgcccttacttaccggattgtcgacaggatattctcc
caggttgctaggaagttcactagcaaagttgaagggaaaatggggtatgaggattttgtc
tatttcatacttgccgaagaagataaatcgtcagagcctagccttgaatattggtttaag
tgcattgacttggatgcaaatgggattcttacgcgaaacgagatgcaattcttttacgag
gaacagttacatcgaatggagtgtatggcgcaagaggctgttctttttgaggatatacta
tgtcagctaattgatatgatcggaccagaggatgaaagctatataaccctgaatgacctg
aagggctccaaactatctggaaacgtcttcaacatcctttttaatcttaataaatttatg
gcatttgagacacgggatcccttcctcattcgtcaggagcgtgagaaccctacgttgaca
gagtgggaccgttttgcacatagagagtacataaggctttcaatggaagaagacgttgaa
gatgcatccaatggaagtgctgaggtttgggatgagtcattggaggctcctttctga
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