Brachybacterium sp. SGAir0954: C1N80_13630
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Entry
C1N80_13630 CDS
T06008
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brr
Brachybacterium sp. SGAir0954
Pathway
brr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N80_13630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brr03019
]
C1N80_13630
03016 Transfer RNA biogenesis [BR:
brr03016
]
C1N80_13630
Enzymes [BR:
brr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C1N80_13630
Messenger RNA biogenesis [BR:
brr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1N80_13630
Transfer RNA biogenesis [BR:
brr03016
]
Prokaryotic type
tRNA degradation factors
C1N80_13630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QCR54510
UniProt:
A0A4P8TK82
LinkDB
All DBs
Position
complement(3026278..3028530)
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AA seq
750 aa
AA seq
DB search
MAMEGPDITATTAVIDNGSFGRREVRFETGRLAQQAAGAVAVYLDDDTMVFSATAVSNKP
KDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPGTDAILAARLTDRPLRPAFVKGLRNE
VQVVLTVMACAPDDSYDVVGINGASASTQISGLPFSGPIGAVRIALMPTAQGGQWVAFPT
FAQLDEAVFSMVVAGRIVGDDVAIMMVEAEATDNSWSLIKEQGAIAPTEEVVAEGLEASK
VFIRSLCEAQIELARTAAKPVREFPLFLDYQEDAYGIVEGAVSERLAAVMQIAAKTEREE
KTEELLAAALEELAGEGKPLAGREKEVSGAYRALTKKLVRQKILTDGVRIDGRGLRDIRQ
LSAEVEVLPRVHGSALFQRGETQILGVTTLNMLKMEQQIDSLGPVDRKRYIHHYNFPPYS
TGETGRVGSPKRREIGHGMLAERALVPVLPGREEFPYAIRQVSEALGSNGSTSMGSVCAS
TLALLNAGVPLKAPVAGIAMGLVSDQVAGETKYAALTDILGAEDAFGDMDFKVAGTSEFV
TAIQLDTKLDGIPASVLAAALSQAREARLHILGVLAEAIDTPDEMSPHAPRVLAVTIPVD
KIGAVIGPKGQMINQIQDDTGADITIEDDGTVYIGATDGPSAEAARSAVNAIANPQVPEV
GERYLGTVVRVVDFGAFVSLTPGKDGLLHVTQLRKLNDGKRVDSVEDVVKVGQKIEVEIR
EIDARGKISLAVVEDDAPESSEAPAETPAE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaaggccctgacatcaccgcgaccaccgcggtcatcgacaacggctcgttc
ggccgtcgcgaggtccgcttcgagaccggccgcctcgcccagcaggccgccggcgccgtc
gccgtctacctcgacgacgacacgatggtcttctcggccaccgccgtgtcgaacaagccc
aaggaccagttcgacttcttccccctcaccgtcgacgtcgaggagcggatgtacgccgcg
ggccgcatccccggctccttcttccgtcgtgagggccgccccggcaccgacgcgatcctc
gccgcgcgcctcacggaccgcccgctgcgccccgccttcgtcaagggcctgcgcaatgag
gtccaggtcgtcctcacggtcatggcctgcgcccccgacgactcgtacgacgtggtgggc
atcaacggcgcctccgcctccacccagatctccggcctgcccttctccggcccgatcggc
gccgtgcgcatcgcgctcatgccgaccgcccagggcggccagtgggtcgcgttcccgacc
ttcgcccagctcgacgaggccgtcttctcgatggtcgtcgccggtcgcatcgtcggcgac
gacgtcgcgatcatgatggtcgaggccgaggccaccgacaactcctggagcctcatcaag
gagcagggcgcgatcgcccccacggaggaggtcgtggccgagggcctcgaggcctccaag
gtctttatccgtagcctctgcgaggcgcagatcgagctcgcccgcaccgccgccaagccg
gtccgcgagttccccctcttcctggactaccaggaggacgcctacggcatcgtcgagggc
gccgtctccgagcgtctcgccgcggtcatgcagatcgccgcgaagaccgagcgggaggag
aagaccgaggagctgctcgccgcggccctcgaggagctcgccggcgagggcaagccgctc
gccggccgcgagaaggaggtctccggtgcctaccgcgccctgaccaagaagctcgtgcgc
cagaagatcctcaccgacggtgtgcgcatcgacggccgtgggctgcgggacatccgccag
ctctccgccgaggtcgaggtgctcccgcgcgtgcacggctccgccctgttccagcgcggc
gagacccagatcctgggcgtcaccacgctgaacatgctcaagatggagcagcagatcgac
tccctcgggccggtcgaccgcaagcgctacatccaccactacaacttcccgccgtactcc
accggcgagaccggccgcgtcggctccccgaagcgccgcgagatcggccacggcatgctc
gccgagcgcgccctggtgccggtgctcccgggccgcgaggagttcccctacgcgatccgc
caggtgtccgaggcgctcggctccaacggctccacctcgatgggctccgtgtgcgcctcg
acgctcgcgctgctcaacgccggtgtgccgctcaaggcccccgtcgccggcatcgccatg
ggcctggtctccgaccaggtagcgggcgagaccaagtacgccgccctcaccgacatcctc
ggtgcggaggacgccttcggcgacatggacttcaaggtcgccggcacctcggagttcgtc
accgcgatccagctggacaccaagctcgacggcatcccggcctccgtgctcgccgccgcg
ctgtcccaggcccgcgaggcgcgcctgcacatcctcggtgtcctcgccgaggcgatcgac
accccggacgagatgtcgccgcacgccccgcgcgtgctcgccgtcaccatcccggtggac
aagatcggcgcggtcatcggcccgaagggccagatgatcaaccagatccaggacgacacg
ggcgcggacatcacgatcgaggacgacggcaccgtctacatcggcgcgaccgacggcccc
tcggccgaggcggcccgctccgcggtcaacgccatcgcgaacccgcaggtccccgaggtc
ggcgagcgctacctcggcaccgtggtgcgcgtggtggacttcggcgccttcgtgtccctc
accccgggcaaggacgggctgctgcatgtcacccagctgcgcaagctgaacgacggcaag
cgcgtggacagcgtcgaggacgtcgtcaaggtcggccagaagatcgaggtcgagatccgc
gagatcgacgcgcgcggcaagatcagcctcgccgtggtcgaggacgacgccccggagtcc
tccgaggcgccggcggagacccccgccgagtga
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