Bradyrhizobium cosmicum: S23_02190
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Entry
S23_02190 CDS
T01796
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
brs
Bradyrhizobium cosmicum
Pathway
brs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S23_02190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brs03400
]
S23_02190
Enzymes [BR:
brs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
S23_02190
DNA repair and recombination proteins [BR:
brs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
S23_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAL73445
LinkDB
All DBs
Position
complement(227948..228763)
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AA seq
271 aa
AA seq
DB search
MRFSLTTWNINSVRLRIELVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHIALN
GQKGYHGVAIVSKIPFESTDIRTFCDKVDSRHISVSFGSKANIAEPLVLHNFYVPAGGDI
PDPALNEKFDHKLRFLDEMKACEPLHPRGEDRHILVGDLNVAPHENDVWSHKQLLKVVSH
TPVETEKLKAALEAGEWVDVARDRIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRAL
KDAVSDFRILRDARSWERPSDHVPVTVTLEV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttccctgacaacctggaacatcaattcggtgcggctgcgcatcgaactggtc
gcgaagtttctcaagagcgcgcggccggacgtgctgtgcctgcaggaaaccaagtgcatc
gacgatgcctttccgctgaagcgcttcaagcggctcggctatgagcatatcgcgctgaac
ggacagaagggctatcacggcgtcgccatcgtctcgaagattccgttcgagtcgacggac
atccggaccttctgcgacaaggtggattcgcgccatatttccgtatccttcggaagcaag
gccaacatcgcagagccgctggtgctgcataatttctacgtgcccgccggcggcgacatt
cccgatcccgcgctgaacgagaagttcgaccacaagctccgcttcctcgacgagatgaag
gcctgcgagccgttgcatccgcgcggcgaggatcgccacatcctggtcggcgacctcaac
gtcgcgccgcacgagaacgacgtgtggtcgcacaagcagctcttgaaagtcgtctctcac
acgcctgtcgagaccgagaagctgaaggccgcgctcgaagccggagagtgggtcgacgtc
gcacgcgatcgcatcccgatgtcggaaaaggtctacacatggtggagctaccgctccgcc
gactggaccgtcggcgaccgcggccgcaggctcgaccacatctgggtctcgcgcgcgctg
aaggatgcggtcagcgatttcaggatcttgcgcgacgcgcggagctgggaacggccgtcg
gaccacgtgcctgtcacggtgacgctggaggtttga
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