Brachybacterium avium: CFK39_09655
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Entry
CFK39_09655 CDS
T04950
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
brv
Brachybacterium avium
Pathway
brv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK39_09655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_09655
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK39_09655
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFK39_09655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_29
Anti-TRAP
AAA_21
SMC_N
DnaJ_CXXCXGXG
nSTAND1
RsgA_GTPase
AAA_16
AAA_25
AAA_22
MeaB
CbiA
DUF5351
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ASK66035
UniProt:
A0A220UD62
LinkDB
All DBs
Position
complement(2147089..2149683)
Genome browser
AA seq
864 aa
AA seq
DB search
MDLPDLSLTGGDDGFVHVRGARLHNLRDVEVDLPRGRLVAFTGVSGSGKSSLAFGTIHGE
SQRRYLESVAPFARRLIGSAVDPQVEAVTGMPPTVALEQRTSAGGARSTVGTTTNLSNAI
RLLYSRAGDHPADVLEKGSALHSGRLTSDFFSPNTPDGACPRCHGAGVLREPTESSMVPD
PSLSITEGAIAAWPGAWLGKNFRDILDTLGVDVHRPWRDLPEQTRQWVLHTEEQPVVTVH
PVREPGQTHGTYRGQWRSVERYLRDTVATSKAESSRRRALTHFSVASCPLCEGHRLGPDA
LRVTYAGRPIWQLAAMPLDDLLAALTSRHEALPEGEGTPEQEAERILLPTVLPVLRTIVG
LGLGHLALDRPAGTLSTGELQRLRLAAQLRSGLFGVAYVLDEPSAGLHPSEKGVLQHLLD
SFLSEGNSVLLVEHDMTLVADADWIVDVGPGAGADGGEVLYSGVVEGLDQAADSVTARYL
QPGPLALRGAAEVRSPRGWFEIDAVHTRTLQGLDLRLPLRSFTAVTGVSGAGKSTLVTHA
LGTVLGERVRTTVADDPDPVAEPGGAAGSEIGIGTGTGTGTSTDLADDRVRHGEVRGSGG
IDRLVHITQKPIGRTPRSCLATYTGLFDRVRRLFADTAEARARGWGVGRFSYNVAEGRCP
ECSGTGHIEVELVFLPGSYATCPRCHGTRYSPETLEVTWQGLSIAEVLSLSVARARDVFA
EDPRISRALDALAAIGLGYLALGQPATELSGGEAQRIKLATELQRTVRGHSVYLLDEPTS
GLHPADVDLLVGELNRLVDAGQTVVVVEHDQRVIAQSDHVIDMGPGAGDKGGKIVAQGTP
AQILAAGASVTGSELRKVARPAHD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacctccccgacctctccctgaccggtggcgatgacggcttcgtgcacgtgcgcggg
gcacgtctgcacaacctccgcgacgtggaggtggatcttccgcgcggtcgactggtcgcc
ttcaccggcgtctccggatccgggaaatcctccctcgccttcggcacgatccacggcgag
tcccagcgccgctatctcgaatcggtcgccccgttcgcccggcggctgatcggcagcgcc
gtggaccctcaggtcgaggcggtgaccgggatgccgcccaccgtcgccctcgagcagcgc
acctccgcgggcggggcccgctccaccgtcggcaccaccaccaacctctccaacgcgatc
cgcctgctgtactcgcgcgccggggaccatcccgccgatgtgctcgagaagggctctgcc
ctccacagcggtcgcctgacctcggatttcttctccccgaacaccccggacggagcctgt
ccccgctgtcacggggcgggtgtgctgcgcgagccgacggaatcctcgatggtcccggat
ccctctctctcgatcaccgagggcgcgatcgccgcctggcccggggcgtggctgggcaag
aacttccgcgacatcctcgacaccctcggcgtcgacgtccatcgcccctggcgcgatctg
ccggagcagacccgccagtgggtcctgcacaccgaggagcagccggtggtgaccgtccat
ccggtgcgcgaaccgggccagacccacggcacctaccgggggcagtggcgcagcgtcgag
cggtacctgcgcgacaccgtggcgacctcgaaggcggaatcttcccggcggcgcgccctc
acccacttctcggtggcatcctgcccgctgtgcgaggggcatcgcctggggccggacgcc
ctgcgcgtgacctacgccggacggccgatctggcagctcgccgcgatgccgctggatgac
ctcctggccgcgctgacctcccgccacgaggcgctgcccgagggtgagggcacccccgaa
caggaggcggaacggatcctgctgcccaccgtgctgccggtgctgcgcaccatcgtcggc
ctcggcctggggcatctggccctggatcgcccagcagggaccctctccaccggcgagctg
cagcggctgcggctggccgcacagctgcgttcgggactgttcggcgtggcctacgtgctc
gacgagccctcggcggggttgcaccccagcgagaagggcgtgctccagcacctgctggac
tccttcctctccgaggggaactcggtgctgctggtcgagcacgacatgactctggtcgcc
gacgccgactggatcgtggacgtgggcccgggcgccggggccgacggcggcgaggtgctc
tactcgggcgtggtcgagggcctcgaccaggcggcggactcggtgaccgcccgctatctg
cagcccggcccgctcgccctgcgcggggccgccgaggtgaggagccctcgcggctggttc
gagatcgacgccgtgcacacccgcacgctgcagggcctcgacctgcgactgccgctgcga
tcgttcaccgctgtcaccggcgtctccggggccggcaagagcaccctggtcacccatgcg
ctcggcaccgtgctcggcgagcgcgtgcgcaccacggtggccgatgatcccgatccggtg
gccgagccgggcggggccgccggctccgagatcggcatcgggaccggcaccgggaccggg
accagcaccgaccttgcggacgaccgggtgcgccacggtgaggtgcggggaagcggcggc
atcgatcggctcgtgcacatcacccagaagccgatcgggcgcaccccgcgctcgtgcctc
gccacctacaccggcctgttcgaccgggtgcggcgcctgttcgcggacaccgccgaggcc
cgggcgcgcggctggggcgtcggccgcttctcctacaacgtcgccgagggccgctgcccc
gaatgcagcggcaccggccacatcgaggtcgagctggtgttcctgcccggctcgtacgcg
acctgcccacgctgccacggcacccggtacagtcccgagacgctcgaggtgacctggcag
gggctgagcatcgccgaggtgctgtcgctgtcggtcgcgcgcgcccgggacgtgttcgcg
gaggatccgcggatctcccgggcactggatgcgctggccgcgatcgggctcggctacctc
gccctcggccagcccgccaccgagctctccggcggtgaggcgcaacggatcaagctcgcc
accgagctgcagcgcaccgtgcgcgggcacagcgtctacctgctggacgagcccacctcg
ggcctgcatccggcggacgtggatctgctggtcggcgagctgaaccggctggtggacgcc
ggccagaccgtggtcgtggtcgagcacgatcagcgcgtgatcgcccagagcgaccacgtg
atcgacatgggcccgggcgccggtgacaagggcgggaagatcgtcgcccagggcactcct
gcacagatcctcgcggcgggcgccagcgtgaccgggagcgagctgcggaaggtcgcccgc
cccgcgcacgactga
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