Brevibacillus sp. 7WMA2: GOP56_12560
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Entry
GOP56_12560 CDS
T06452
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOP56_12560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brw03019
]
GOP56_12560
03009 Ribosome biogenesis [BR:
brw03009
]
GOP56_12560
Enzymes [BR:
brw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
GOP56_12560
Messenger RNA biogenesis [BR:
brw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GOP56_12560
Ribosome biogenesis [BR:
brw03009
]
Prokaryotic type
rRNA helicases
GOP56_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QIC06362
LinkDB
All DBs
Position
complement(3042793..3044253)
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AA seq
486 aa
AA seq
DB search
MAKFEQFGLRPEIMQGISDLFYKEPTAIQEEAIPLILEGKDVIGQAQTGTGKTAAFVLPI
LQKLQEGKKDIQTLILTPTRELSIQIASEIEKLGKHLNVSVLSLHGGTDIERQMNKLKGT
VHIVVGTPGRVLDHMRRETLHFGRIHTLVLDEADKMLEMGFLEDVEKIIVSTPSSRQVLL
FSATMPDMVKKLGQRFMKQPPHIKIESKQKTVANITQEYYVINQTDKIDALLDLIEVTKP
FLGIIFANTQQRVKILTTRLQEAGYDAKALYGDLSQKKRETLMKDFRNMKFQFLVATDIA
ARGLDVEGVTHVFNYDIPSDVESYIHRVGRTGRANQLGNSISFVTPRQKSVMARFGSATK
ADIEEKLLTHTRHLDAGRKARAAEREQHYTELKTEKKKQQQIAKAEKEAPLKNALVKNKK
VKPGYKRKLKQEMEEWKTQYDRNHKREEAKKAAKANKGKAKPRSGGQSAAGRPGQAPSRP
GKRFGK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttcgaacaatttggtttgcgaccggagattatgcaggggatttccgacctg
ttttataaagagccgacagctattcaagaagaagcgattccattgattttagaaggtaag
gatgtcatcggacaagcgcaaacgggtactgggaaaacagcagcgtttgtattgccgatc
ctccaaaagctacaggaaggaaaaaaggatattcagacattgatccttactccaacccgt
gagctttctattcagattgctagtgaaattgagaagctggggaaacacctgaatgtgagt
gtgttatccttgcatggcggtacagatattgagcgtcaaatgaataagctaaaagggact
gttcatatcgtagtgggaactccaggacgcgtacttgatcatatgcgtcgtgaaacacta
cattttggccgcattcatacattggtattggatgaggctgacaagatgctagagatgggc
tttttagaggatgtggaaaagattattgtttccacaccaagcagccgacaggtattgcta
ttctcggcgactatgcctgatatggtaaagaagctgggacaacgttttatgaagcaacca
ccgcatattaaaattgaatcaaagcaaaaaacggttgctaatatcacacaagaatactat
gtaatcaatcaaacagataaaatcgatgcgcttcttgatctcattgaggtcactaagcca
ttcctaggtattatttttgctaacacacaacagcgtgtaaagatcttaacaacacgttta
caagaggctggctatgatgccaaggcgttatacggtgatttgtctcaaaagaaacgcgaa
actctgatgaaggattttcggaatatgaaattccagttccttgtagctaccgatattgcg
gctcgcggacttgatgtcgaaggggttactcatgtatttaactacgatatcccaagcgat
gtagaaagctatattcaccgtgttggacgtacgggacgcgctaatcagcttggaaattct
atttcttttgtgactccacgccaaaaaagcgtcatggctcgctttggttctgcaacaaag
gcggatatcgaagaaaaattacttacgcatactcgtcacttggatgcagggcgcaaagca
cgtgcagcagagcgtgagcagcattatactgagctcaaaaccgagaagaagaaacagcag
caaattgcaaaagcagaaaaagaagctccacttaaaaatgctcttgtaaaaaataaaaag
gtaaagcctggttataagcgcaagctgaagcaagaaatggaagagtggaaaacacaatac
gaccgtaatcacaagcgtgaagaagcaaagaaagctgctaaagcaaataaaggtaaagca
aaacctcgttcaggaggacagtcagcggctggtcgtccgggacaagcaccaagcagacct
ggtaaacgatttggcaaataa
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