Brevundimonas subvibrioides: Bresu_1596
Help
Entry
Bresu_1596 CDS
T01291
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bsb
Brevundimonas subvibrioides
Pathway
bsb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bresu_1596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsb03021
]
Bresu_1596
03400 DNA repair and recombination proteins [BR:
bsb03400
]
Bresu_1596
Enzymes [BR:
bsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bresu_1596
Transcription machinery [BR:
bsb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bresu_1596
DNA repair and recombination proteins [BR:
bsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bresu_1596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ADL00907
UniProt:
D9QGU1
LinkDB
All DBs
Position
1567690..1571883
Genome browser
AA seq
1397 aa
AA seq
DB search
MNQEVLNIFNAVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIELASPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQDEFGDDGFTA
EIGAEAVRNLLMGIDLHSEAERHRGELADSPSEVKAKKASKRLKLIEAFLESGNKPEWMI
LTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PDLKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPQVWDILEEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGEPGEGKLFANVGEIDAALD
AGVVTLHTRIKARWTEEDKDGNEITKVIDTTPGRMKLGALLPKNPNVGYRLLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMGLGFKEAARAGISFGKDDIVIPAKKVEIVAATRTL
VEEYEQQYADGLITKGEKYNKVVDAWAKATDRVADEMMGEIAQPRVLASGRTAEINSVYM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPIVSNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEEDCGSTRGITLRAVVEGGDVLVSLGQRVLGRYN
AEDIKAPGTDTVLFPADTYLVEDVVEVIDREGVQSVKVRSALTCEAEAGICGMCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFYEATNAGIIKIVGPTV
TGTQGDLVSMSRNVVVTVMVDGKDRESYKIPYGGRLRVKEGEEVKKNQRLAEWDPYTTPI
ITEVGGTVRFEDLTEGLSFREETDEATGIAQRVVIDWRASPRGSDLRPAMGITAGDAYTK
LASGSDARYLLPVGAILSVANGDEVKPGEILARIPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPELNADGEQPEAVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
IIDSGETTLIRGDTVEVAEAVLENEKVEKRGGRPATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVNGKKDTLEGLKENVIVGRLIPAGTGAYLRSLQKVANARDAELTSTREA
AIEPLPAELQLELAESE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaacgcggtcccggtcaccccgaccttcgaccag
atcaagatcgccctcgcgtcccccgaaaagatccgctcgtggtccttcggcgagatcaag
aagcccgagacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcg
cgtatctttggcccgaccaaggattacgaatgcctgtgcggcaagtacaagcgcatgaaa
tacaagggcatcatctgcgagaagtgcggcgtggaggtcaccctggcccgcgtccggcgc
gagcggatgggccacatcgaactggcgtcccccgtcgcccacatctggttcctgaagtcc
ctgccgtcgcgcatctcgctgatgctcgacatggcgctgaaggacgtggagcgggtgctc
tacttcgagaactacatcgtcaccgagccgggcctgaccccgctgaagcagaaccagctg
ctgacggaagacgagttctatcgctaccaagacgagttcggcgatgacggcttcacggcc
gagattggcgccgaggccgtgcgcaacctgctgatgggcatcgacctgcactcggaggcc
gaacgccaccgcggcgaactggccgacagcccgtcggaagtgaaagccaagaaggcctcc
aagcgcctgaagctgatcgaggccttcctcgaatccggcaacaagcccgagtggatgatc
ctgacggtcgtgccggtcatcccgccggaactgcgtccgctggtgccgctggacggcggt
cgtttcgcgacctccgacctgaacgacctgtaccgccgcgtgatcaaccgcaacaaccgc
ctgaagcggctgatggaactgcgcgcgcccgacatcatcatccgcaacgaaaagcggatg
ctgcaggaatcggtcgacgccctgttcgacaacggccgtcgcggtcgcgtcatcacgggc
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggcaagcagggccgcttc
cgccagaaccttctgggcaagcgcgtcgactattcgggccgttcggtcatcgtggtcggt
cccgacctcaagctgcacgagtgcggcctgcccaagaagatggcgctcgagctgttcaag
ccgttcatctatgcgcgtctggacgccaagggcctgtcgggcaccgtcaaacagtccaag
cgcatggtcgagcgcgaacagccccaggtgtgggacatcctcgaagaggtgatccgcgag
cacccggtcatgctgaaccgcgcgccgacgctccaccgtctgggcatccaggcgttcgag
cccaagctgatcgaaggcaaggccatccagctgcacccgctggtctgcgccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgagcctcgaggcccagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcctgggcctgtactacctgtcgctggtcaaggac
ggtgagcccggtgaaggcaagctgttcgccaacgtcggcgagatcgacgcggcgctcgac
gccggtgtcgtaaccctgcacacccgcatcaaggcgcgctggaccgaggaagacaaggac
ggcaacgagatcaccaaggtgatcgacacgacgccgggccggatgaagctgggcgccctg
ctgcccaagaacccgaacgtcggctaccgcctgctcgagaagaacctgacgaagaaggaa
atcggcaacctgatcgacgtggtctatcgccactgcggtcagaaggcgacggtgatcttc
gccgaccagatgatggggctgggcttcaaggaagccgcgcgcgccggcatctcgttcggc
aaggacgacatcgtgatcccggccaagaaggtcgagatcgtcgccgccacccgcacgctg
gtcgaggaatacgagcagcagtacgccgacggcctgatcactaagggcgagaagtacaac
aaggtcgtcgacgcctgggccaaggccacggaccgggtcgccgacgagatgatgggcgag
atcgcgcagccgcgcgtcctggcctcgggtcgtacggccgaaatcaactcggtctacatg
atggccaactccggtgcccgcggatcgcaggcccagatgaagcagctcggcgggatgcgc
ggcctgatggccaagccgtccggcgagatcatcgagaccccgatcgtgtcgaacttcaag
gaaggcctgaccgtcctcgaatacttcaactcgacccacggggcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttacctgacccgccgtctggtggacgtggcg
caggactcgatcgtcaccgaggaagactgcggttccacgcggggcatcaccctgcgcgcc
gtggtcgagggcggcgacgtcctggtctcgctggggcaacgcgtcctgggtcgctacaac
gccgaggacatcaaggccccgggcaccgacaccgtgctgttcccggccgacacctatctg
gtggaggacgtggtcgaggtcatcgaccgcgagggcgtccagtcggtgaaggtccgctcg
gccctgacctgcgaggccgaagccggcatctgcggcatgtgctacggccgtgacttggcc
cgcggcaccaacgtcaacatcggcgaagcggtcggcgtcatcgcggcgcaatcgatcggc
gagccgggcacccagctgacgatgcggaccttccacatcggcggcacggcccaggtggcg
gaaacctcgttctacgaggcgaccaacgccgggatcatcaagatcgtcggaccgaccgtc
accggcacccagggcgacctggtgtcgatgagccgcaacgtcgtcgtcaccgtcatggtc
gatggcaaggaccgcgagtcgtacaagatcccgtacggcggccgtctgcgcgtcaaggaa
ggcgaagaggtcaagaagaaccaacgcctggccgagtgggacccctacaccaccccgatc
atcaccgaagtcggcggcaccgtccgcttcgaggatctgaccgagggcctgtcgttccgc
gaggagaccgacgaagcgacgggcatcgcccagcgcgtcgtcatcgactggcgtgcctcg
ccccgcggttcggacctgcgtccggccatgggaatcacggcgggcgacgcctacaccaag
ctggcctcgggctccgacgcccggtacctgctgccggtgggggccatcctgtcggtcgcc
aacggcgacgaggtcaagcccggcgagatcctggcccgtatcccgaccgagggtgccaag
acgcgcgacatcaccggcggtctgccgcgggtggccgagctgttcgaggcccgtcgtccc
aaggattgcgcggtcatcgccgagatggacggccgggtcgaattcggtcgcgactacaag
aacaagcgccggatcaagatcacgccggagctgaacgcggacggcgaacagcccgaagcg
gtcgagttcctgatccccaagggcaagcacatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaaccccgatccgcacgatctgctgcgcatccagggc
gtcgaggcgctggccgagtatctggtgaacgaagtgcaggaggtctatcgactgcagggc
gtgccgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgag
atcatcgactcgggtgagaccaccctgatccgtggcgacacggtcgaggtggccgaggcg
gtcctggagaacgagaaggtcgagaagcgtggcggccgtccggccacgacgcagcccgtc
ctgctcggcatcaccaaggcgtcgctgcagacccgcagcttcatctcggcggcgtccttc
caggagaccacccgcgtcctcaccgacgcgtcggtcaacggcaagaaggacacgctggaa
ggcctgaaggagaacgtcatcgtcggccgcctgatcccggcgggcacgggggcctacctc
cgcagcctgcagaaggtcgccaatgcccgcgacgccgagctgacctcgacccgcgaagcc
gcgatcgagcccctgccggccgagctgcaactggagctggccgagagcgagtga
DBGET
integrated database retrieval system
