Bipolaris sorokiniana: COCSADRAFT_34484
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Entry
COCSADRAFT_34484 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSADRAFT_34484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_34484
03012 Translation factors [BR:
bsc03012
]
COCSADRAFT_34484
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
COCSADRAFT_34484
Translation factors [BR:
bsc03012
]
Eukaryotic type
Release factors
COCSADRAFT_34484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
19137679
NCBI-ProteinID:
XP_007696623
JGI:
Cocsa1_34484
UniProt:
M2TG35
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSGKNEQPNEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEFG
TASNIKSRVNRLSVLSAITSTQQRLKLYSKVPPNGLVVYCGEIITAEGKERKINIDFEPF
KPINTSLYLCDNKFHTEALSELLESDQKFGFIIMDGNGALFGTLSGNTREIVHKFSVDLP
KKHGRGGQSALRFARLREEKRHNYVRKVAELAVQNFITADKVNVAGIILAGSADFKNDLN
QSDLFDNRLQSKVIKVVDVSYGGENGFNQAIELAGETLSNVKFIQEKKLINEYFDHISKD
SGKVCYGIDDTLKALEAGAAETLIVFENLEITRWVLKSSAGAEIILHTTKLQEEDRSIFM
DKETGQEMEVIDQGSMLEWLAEKYRDFGANLEFVSDRSSEGNQFVKGFGGIGAILRYALN
FEQLVEVDDDEDEFYDD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaagaacgagcagcccaacgaggccgagaagaacattgagatctggaaggtc
aagaagctcatcaagcgtctcgaggccgcccgcggaaatggcacatccatgatttcgctc
atcatcccccctaaggatcagatttcacgcgccgccaaaatgttggctgaagagtttggc
actgcctccaacatcaaatcccgcgtcaaccgtctctcagtcctgtccgccatcacatcc
acccagcagcgtctgaagctctactccaaggtccctcccaatggcctcgttgtctactgc
ggtgaaatcatcaccgctgaaggcaaggagcgcaagatcaacattgactttgagcccttc
aagcccatcaacacctcgttatacctgtgtgacaacaagttccataccgaggccctgagc
gaactgctcgagtctgaccaaaagtttggtttcatcatcatggacggaaacggtgccctt
ttcggtactctgtcaggaaacacgcgtgagattgtccacaagttctcggtcgaccttcct
aagaagcacggtcgtggtggtcagtctgctctgcgtttcgcccgtctgcgtgaagaaaag
cgccacaactacgtccgcaaggtcgccgaattggctgtccagaacttcatcaccgctgac
aaggtcaacgttgctggaatcattctcgctggttctgccgacttcaagaacgacctcaac
cagtccgaccttttcgacaaccgtctgcagtccaaggtcatcaaggttgtcgacgtgtcc
tacggaggcgaaaacggtttcaaccaggctattgaactcgcaggcgagactctgagcaac
gtcaagttcattcaagaaaagaagctcatcaacgagtactttgaccacatctccaaggac
tctggaaaggtctgctacggtatcgatgataccctgaaggccctcgaggctggtgcggcc
gagactctgattgtctttgaaaacttggaaatcactcgatgggttctcaagagctctgcc
ggtgccgagatcattctccacactacaaagctccaagaagaagaccgaagcatcttcatg
gacaaggaaaccggacaagagatggaagtcattgatcagggttccatgctcgagtggctt
gccgaaaagtaccgcgactttggtgccaacctcgaattcgtctcggaccgttcttccgag
ggtaaccagttcgtcaagggctttggtggtatcggtgccatcctgcgttatgccctcaac
tttgaacagctcgtcgaggtcgacgacgatgaagacgagttctacgatgattga
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