Bipolaris sorokiniana: COCSADRAFT_76422
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Entry
COCSADRAFT_76422 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14301
nuclear pore complex protein Nup107
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_76422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_76422
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_76422
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCSADRAFT_76422
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
COCSADRAFT_76422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
EF-hand_like
MRP-S27
Motif
Other DBs
NCBI-GeneID:
19140564
NCBI-ProteinID:
XP_007694850
JGI:
Cocsa1_76422
UniProt:
M2TK59
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MALRPFSRQSQSTAAQSPNSNALFFGASRPTNGTTSNDPLQPLRAMADRVGKEVEKFAER
VDHWHTHGNDSKRAKYHTTVKLVGKFQDVAESHVKELKRTAEAENKGSLSKTIRRQIQSM
ADASENAPQSLFAQSSQSVNSSIENNTAPVSANIQELREWQAELATWKLLKLVIEHYHPD
PDTDVAAEKKARLETAGGTARYCKNSEIWDRFILEDDQAKEKALILRWLEQTARDSESDV
KAITTALEEHSGKGAHTWTSGWLDTKAKIKQAKRMEGAEQPLKPTNTNIQTSDKTANLVT
QLDPDAPSRQKRALEKNDEYYERSLWMVAYEMMRRGLPWTTIVNWCYERNESWRGVSIGA
AYESHPEGGPNVAGPTVGYLFRRMCFYAARGARIPYEGAVYGLLSGDLKQVQAVCRSWDD
HLYAHYNALLLSRFDMYLQRNYPTKVTESLTQKFLFQDAVANIGDWEASPEKVIGILKQQ
RSTASQAVSPIKLIQGALIGRDADDLMLKVGMALADMFAQDKRPHSLIIHPDSQEEDRSP
MPAGEYRTFEAERYYQNLVKDPHAFRILVHIFIVLRNGLHTLFEDTQHDKQFLTMDNVIA
AYIEFLRLTQRFDAIPLYAAQLIEERAAYTLARVLPDIKNSTEQRHCVALMESYRLDVIQ
VVSQSFTFAARDSGFTHFNSAGITVITNPIKRFKILEPVSVPHEQVLWPGVRIKRSFDGE
QISEQDEIIVDALQWYNYIGKDYEHTFEHLNNALTIFLLNGRLAAAEKVIDDLSVESLSL
SRTEALTGYPFDMMASGAEEQDERQLHEHRDSLSAAARAAAIPISQLPDANQHRELVMQL
RQASLPYYNLQQIVRLLVLFREWREEEQALIQIRADRQKETTGAKAKPDTQHTKALLDSI
STIFDTLLPSISLYSAADPHYLTEQTWDLLKAYIPDMVLAYLSVLQSASWFLNKDPAIKA
MEVAVVIADKSNEWLQRCLLETGRMSEVLECLAGVSKCMLKLTEGGKEKGNKKRGGKGET
LRIWDLGAR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacgacccttctcgcgccagtcgcagtcgactgcagcacagtcaccgaatagt
aatgcgcttttttttggcgcttcccgaccaacaaatggcaccacctcaaacgatccgctc
caaccactgcgcgcaatggccgaccgcgtgggcaaagaagttgagaagtttgcagagcga
gtcgaccactggcatacacacggaaacgactcgaagagggccaagtaccacaccacggtc
aagttggtgggcaaattccaggatgtcgcagaatctcatgtcaaggagctgaagcgaaca
gccgaagcagagaacaagggcagtctgagcaaaactatccggcggcagatacagagcatg
gcagatgcgtcggagaatgcgccccagagcctcttcgctcagtcatcccaatccgtcaat
tcgtcgattgagaacaacaccgcccctgtttccgcaaacatccaggagcttcgagaatgg
caggccgagcttgcgacatggaaactactcaagctcgtcatcgaacactaccaccccgac
cccgataccgatgtggctgcagagaagaaggcgcgtttggaaactgctggaggcactgca
cggtactgcaagaatagcgagatttgggaccggttcatactggaggatgaccaggcgaaa
gagaaggctcttattcttcgctggttagagcagactgcacgagatagcgaaagtgatgtc
aaggccattactacagcactcgaggagcattcgggcaagggtgcgcatacatggacaagt
ggctggctcgacaccaaggccaagatcaagcaggcgaagcgtatggagggtgccgaacag
ccattaaagcccaccaacacaaacatccagacctcggacaagaccgcgaaccttgttact
cagctcgacccagacgctccctctaggcagaagcgtgcgcttgaaaagaacgacgagtac
tacgagcgttccctttggatggtcgcatacgagatgatgcgccgtggactgccgtggacg
accattgtcaactggtgctatgaacgaaacgaatcctggcgcggagtcagcattggagca
gcatatgagagtcaccctgaaggtggtcctaatgttgccgggccaactgttggctatctg
ttccgccgcatgtgtttctacgctgcgaggggggcacggataccttacgagggcgcagta
tacggtctgttgagtggagacttgaagcaagtgcaagcagtctgccgatcttgggacgac
catctttatgcgcattacaacgccctccttctttcccggttcgatatgtacctccaaagg
aactaccctaccaaggtgacggagagcctgacccaaaagttccttttccaggatgctgta
gccaacattggagattgggaggcttcgcccgagaaggtcattggtatattaaagcagcag
aggagtaccgccagccaagccgtctcaccgatcaagctcattcaaggcgcgcttatcggc
agagatgctgacgatctgatgctgaaagttggcatggccttagcagatatgtttgctcaa
gacaagcgacctcacagcctcatcatacacccagattcacaagaggaagaccgatcacct
atgccagcgggagaataccggacctttgaagcggagcgatactaccagaaccttgtaaaa
gatccccacgctttccgaatcttggtgcacatcttcattgtcctccgtaatggacttcat
acactctttgaggatactcaacatgacaagcaattcctaactatggacaacgttatcgct
gcctacattgagttcctgcgccttactcaacgtttcgatgccatcccgctttacgcggcg
cagctgatcgaagagcgtgcggcatataccctagcacgcgtccttcccgacatcaaaaac
agcactgagcagcggcactgcgttgcgcttatggaatcatatcgactcgatgttatccag
gtcgtgtctcagagctttacgtttgctgcacgggatagtggattcacccactttaacagt
gcaggtatcacagtcatcacaaatcccatcaagcgtttcaagattttggagccggtcagc
gtacctcatgagcaagtcctgtggcctggtgtgcgtataaagcggtcattcgatggggag
caaattagcgagcaagacgagattattgttgatgctttgcaatggtacaactacattggc
aaggattacgaacacacatttgagcacctcaataatgcgctaaccatcttccttctcaac
ggtcgcctagctgctgccgagaaggtcattgatgatctcagcgtcgagtctctgtcgctg
tcgcgtacagaagcccttactggttatcctttcgatatgatggcttctggagcagaagag
caagatgagcgtcaactccatgagcatcgggatagtctctcagccgctgcacgagctgct
gcaattcctatttcacaattacctgatgccaaccagcacagggaattggtgatgcaattg
cgccaggccagcttgccatactacaatctccagcaaatcgttcgcctgctcgtccttttc
cgcgaatggcgcgaggaggagcaagcactcatacagatccgtgcggaccgtcagaaagag
accaccggcgcgaaagcaaaaccagacactcaacatacgaaggctcttctagactccatt
tccaccatctttgacaccctcctaccctcgatctctctttattctgctgccgaccctcac
tacttgacagagcaaacgtgggatctcctcaaggcttacattcccgacatggttcttgcc
tatctctccgttctccagtctgcatcgtggttcttgaacaaggaccccgctatcaaggcc
atggaggttgccgttgtcatagccgacaagagtaacgagtggctgcaacgctgtctgcta
gaaactggcaggatgagtgaggtattggagtgcttggctggtgtatccaagtgcatgttg
aaactcaccgaaggcggcaaggagaagggtaataagaagcgagggggtaagggagagacg
ctgaggatatgggatttgggtgctagataa
DBGET
integrated database retrieval system
