Bifidobacterium scardovii: BBSC_2185
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Entry
BBSC_2185 CDS
T03975
Name
(GenBank) ATP-dependent DNA helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBSC_2185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_2185
Enzymes [BR:
bsca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBSC_2185
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBSC_2185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
SNF2-rel_dom
AAA_22
AAA_30
Rv0078B
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAQ32265
LinkDB
All DBs
Position
complement(2634099..2636597)
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AA seq
832 aa
AA seq
DB search
MSITLETPIASLMTNKRRAGALKSLGIVSVADALTYYPFRVTDPVPLRAIREARIGETMA
FAGVIRDLRVVPMIARRGYRLEALIDDAAFARSRHVAGSVARLVFFSYKKQYVDWLSMRL
RAGAGAVVSGQPSEFNGQLQFTHPEILTVAPGGMSEPTDAGADDAMFVPASSALRYDADT
MEAGLRRVCRPRPVYHATSRISSEHIHESILGFLHALAGDEEPAAPDDAHAPETGVDGND
GEAGVAAARETLRRMIPDILPESVRADRQLMHRADAFAAIHEPDTTAAFKRAIDTMRYEE
AFVCQVALLQARQHAHKADAAPCADLSVRDRFIASLPFALTAGQREVVDDIGADMARDYP
MQRLLQGEVGSGKTVVALAALLQAVGSGRQAVLVAPTQVLAEQHHATIGAMVGKVDPKIP
VILLTGGMKLAARRRALAQAASGEPCIIVATHAAFSKTFQAPNLALAVIDEQHRFGVEQR
ESLRTKADMAPHLLVMTATPIPRTAAMTWFGDLDISWLTELPGGRKPIRTFIVPEADGRT
MANMFAHLRQRIDAGERAYVVCPRIDADEDESGDASGDTGIGVYDESDAFARERRLAVSG
AAGGAPAARQAGGGPSADQQTDDEREQRPPLHSVHEIVDRLSGLPQFQGVAFATLTGRDD
DETKTRVMEEFADGATPILVATTVIEVGVDVPQASCIVIFDADRYGLSQLHQLRGRVGRG
GTNSWAFLISRAEPGSPAEQRLQVIQGTLDGSQIAQADLEFRGAGDVLGDAQSGGKSSLK
LLRVVKDADIIADARARAERLLQADPSLSGEVQLAGAVLDFTRGNETFLTSS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagcattacgttggaaaccccgattgcgtcgctgatgacgaacaagaggcgtgccggc
gcgctcaagtcattgggcatcgtctcggtcgccgatgcgctgacctattatccgttccgc
gtcaccgatccggtgccgctgcgggcgatccgcgaggcgcgcatcggcgagacgatggcg
ttcgccggcgtgatccgcgatctgcgcgtcgtgccgatgattgcgcgccgggggtaccgg
ctggaggcgctgatcgacgatgcggcgttcgcccgctcgcgccatgtggccggatccgtg
gcccggctcgtgttcttctcgtacaagaagcagtatgtcgactggctgagtatgcggctg
cgtgccggcgccggcgcggtcgtgtcggggcaaccgagcgagttcaacgggcagctgcag
ttcacgcatccggaaatactgactgtcgcgcccgggggaatgagcgagccgacggatgcc
ggcgccgatgacgccatgtttgttcccgcgtcgtccgcgctgcgctacgatgcggacacg
atggaggccggcctgcgccgcgtctgccggccgcgcccggtctaccacgcgacatcgcgc
atctccagcgagcatatccacgaatcgattctgggctttctgcatgccttggccggcgac
gaggagccggcagcgccggatgacgcgcatgcgccggaaacgggcgttgacgggaacgac
ggcgaggcgggcgttgccgccgcgcgcgagacactgcgccgcatgatccccgacatcctt
cccgaatcggtgcgtgccgatcggcagctgatgcaccgcgccgatgcgttcgccgcgatc
cacgagcccgacaccaccgccgcgttcaagcgcgccatcgacacgatgcgctacgaggag
gcgttcgtctgccaggtcgcgctgctgcaggcccggcagcatgcgcataaggccgatgcc
gcgccgtgcgcggacctgtccgtccgcgatcggttcattgcgtcattgccgttcgcgctg
accgctgggcagcgggaggtcgtcgacgacatcggcgccgatatggctcgcgactatccg
atgcagcgcctgctgcagggcgaggtcggctccggaaaaaccgtggtcgcgctggcggcg
ctgctgcaggcggtcggctcgggccgtcaggcggtgctggtggctccgacgcaggtgctc
gccgagcagcatcacgccacgatcggcgccatggttggcaaggtcgatccgaagatcccg
gtcatcctgctgaccggcggcatgaaactggccgcgcgtcgccgcgcgcttgcgcaggcc
gccagcggggagccgtgcatcatcgtggccacgcatgccgcattctccaagaccttccag
gcgccgaacctggcgttggcggtgatcgacgagcagcatcgcttcggcgtcgagcagcgt
gagtcgctgcggacgaaggcggatatggcgccgcatctgctggtcatgaccgcgacgccg
atcccgcgcacggccgccatgacctggttcggcgatctggacatctcgtggctgaccgag
ctgccgggagggcgcaagccgatccgtacgttcatcgtgcccgaggctgacgggcgcacg
atggccaacatgttcgcgcatctgcgccagcgcatcgacgcgggggagcgggcctacgtg
gtctgcccgcgcatcgacgcggacgaggacgagtccggggacgcgtccggcgacaccggc
atcggcgtatacgacgagtccgacgcgttcgcccgcgagcgtcgactggccgtttccggc
gccgcgggaggtgccccggcggcccggcaggccggtggcggcccgtcggccgaccagcag
acggacgacgagcgtgagcagcgcccgccgctgcattcggtgcatgaaatcgtcgatcgg
ctgtccgggttgccgcagttccagggcgttgcgttcgccacgctcacggggcgcgacgac
gatgagacgaagacccgggtgatggaggaattcgccgatggcgcgacgccgattctggtg
gccaccacggtgatcgaggtcggcgtggacgtgcctcaggccagttgcatcgtgatcttc
gacgcggaccgttacggcctgtcgcagctgcaccagctgcgcggccgcgtcgggcgcggc
ggcaccaacagctgggcgttcctgatctcccgcgccgagccggggtcgccggccgaacag
cggctgcaggtgatccagggcacgctggacggttctcaaatcgcgcaggccgatttggaa
ttccgcggtgccggcgatgtgctcggcgacgcgcagtcgggcggcaagtccagcctaaag
ctgctgcgcgtggtcaaggacgccgacatcatcgccgacgcccgcgcccgcgcggaacgg
ttgctgcaggccgatccgtcgttgtccggtgaagtgcagctcgccggtgccgtgctggac
ttcacgcggggaaacgagaccttcctgacatcgtcgtga
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