Blastococcus saxobsidens: BLASA_3107
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Entry
BLASA_3107 CDS
T01752
Symbol
sigF
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsd03021
]
BLASA_3107 (sigF)
Transcription machinery [BR:
bsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BLASA_3107 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_IclR
DUF7343
HTH_3
MarR
Sigma70_ECF
HTH_20
DUF134
Motif
Other DBs
NCBI-ProteinID:
CCG03976
UniProt:
H6RPB7
LinkDB
All DBs
Position
2973638..2974594
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AA seq
318 aa
AA seq
DB search
MTRSAATDSVEEEPLDATHEAPTGPSDEPAVDPPDTSPAAPAAEAEEPTVVAGAPVVEPD
APPLSENRKRAERTAPLFAELASLEKDDPRRERLREILVEEHLPLVRHFARRFSNRGEPF
DDLLQVGTLGLIAAIDRFDPTRGVEFLSFAVPTITGEIKRHFRDQGWSVRVPRRLQELHL
SLNAAVGELAQKNGRAPTPSELAEHLGIPRAEVLEGLAVANAYRSSSLDERLSGDDDSPT
LAATLGEEDAALEGVEYRESLQPLLATIPARERRILILRFFGNMTQSQIAADIGISQMHV
SRLLSQTLAKLREGLLKD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgacccggtcggctgccaccgactccgtcgaggaggagccactggacgccacccacgag
gcgccgaccggcccctcggacgaaccggccgtcgacccgcccgacacgtcgccggcggcg
cccgccgccgaggcggaggagccgacggtcgtagcgggcgcaccggtggtggagcccgac
gcgcccccgctgtcggagaaccggaagcgggccgagcgcaccgcaccgctgttcgcggag
ctcgcgtcgctggagaaggacgacccgcgccgcgagcggctgcgggagatcctcgtagag
gagcacctgcccctcgtccggcacttcgcccgccggttcagcaaccgcggggaaccgttc
gacgacctgctgcaggtcggcaccctcggcctgatcgccgcgatcgaccgtttcgacccg
acccgcggggtggagttcctctccttcgcggtgccgacgatcaccggtgagatcaagcgg
cacttccgcgaccagggctggtcggtccgcgtgccccgccgcctgcaggagctgcatctc
tcgctgaacgccgccgtcggcgagctggcgcagaagaacggtcgggccccgaccccgagc
gagctggccgagcacctcggcatcccccgcgcggaggtgctcgaggggctcgccgtggcc
aacgcctaccgcagcagctcgctggacgagcggctctcgggcgacgacgactcccccacc
ctggcggccacgctgggcgaggaggacgccgcgctggagggcgtggagtaccgcgagtcg
ctgcagccgctgctggccacgatcccggcccgggagcgccgcatcctgatcctgcggttc
ttcggcaacatgacccagtcccagatcgcggccgacatcggcatctcgcagatgcacgtc
tcccggctgctgagccagacgctggccaagctgcgcgagggcctgctcaaggactga
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integrated database retrieval system
